WormBase Tree Display for Gene: WBGene00044642

WBGene00044642 SMap: S_parent: Sequence: F56D6
  Identity: Version: 3
    Name: CGC_name: clec-69 Person_evidence: WBPerson261
            WBPerson655
      Sequence_name: F56D6.15
      Molecular_name: F56D6.15
      Other_name: CELE_F56D6.15 Accession_evidence: NDB BX284604
      Public_name: clec-69
    DB_info: Database: WormFlux gene WBGene00044642
        NDB locus_tag CELE_F56D6.15
        NCBI gene 3896775
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 Sep 2005 17:37:12 WBPerson1849 Event: Split_from: WBGene00018970
        2 28 Sep 2005 17:40:12 WBPerson2970 Name_change: CGC_name: clec-69
        3 27 Sep 2013 09:38:36 WBPerson4025 Event: Changed_class: CDS Pseudogene
      Split_from: WBGene00018970
    Status: Live
  Gene_info: Biotype: SO:0000336
    Gene_class: clec
    Allele (25)
    Strain: WBStrain00032356
      WBStrain00036990
      WBStrain00004710
    RNASeq_FPKM (74)
    Ortholog (13)
    Paralog (32)
    Structured_description: Automated_description: Is affected by several genes including daf-16; daf-2; and dpy-10 based on RNA-seq and microarray studies. Is affected by eighteen chemicals including rotenone; D-glucose; and sesamin based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: F56D6.15:wp239
    Corresponding_pseudogene: F56D6.15
  Experimental_info: Expr_pattern: Expr1152472
    Microarray_results (13)
    Expression_cluster: WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044760:somatic_specific
      WBPaper00045571:germline-ablation_upregulated
      WBPaper00045774:clk-1_upregulated
      WBPaper00048971:daf-16(mgDf50)_downregulated_L1
      WBPaper00049368:daf-2(e1370)_downregulated
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
      WBPaper00049920:Glucose-Diet_upregulated_N2
      WBPaper00050096:P.aeruginosa_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050843:sesamin_upregulated
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053020:sta-1(ok587)_upregulated
      WBPaper00053308:SMG-2_associated_NMD(-)_upregulated_ClassI
      WBPaper00053814:25C_downregulated_PY79
      WBPaper00053814:OP50_vs_PY79_downregulated_PY79
      WBPaper00055013:hmg-3(bar24)_downregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
      WBPaper00055386:daf-2(e1370)_downregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059609:malt-1_ilc-17.1_nfki-1_upregulated
      WBPaper00059839:S.maltophilia_regulated
      WBPaper00060871:M.humicola-extract_1h_regulated
      WBPaper00060871:M.humicola-extract_4h_regulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
      WBPaper00061081:E.faecalis_downregulated_N2
      WBPaper00061527:asah-1-asm-2
      WBPaper00061530:nhr-49(e2144)_upregulated
      WBPaper00062345:bortezomib_30min_upregulated_N2
      WBPaper00062345:bortezomib_30min_upregulated_zip-1(jy13)
      WBPaper00062354:H.zoospora_6h_regulated
      WBPaper00062440:crh-1(n3315)_upregulated
      WBPaper00062534:fat-P-80_upregulated
      WBPaper00062534:fat-P-80_upregulated_ech-6(RNAi)
      WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
      WBPaper00064130:Beta-Amyloid_8h_upregulated_mRNA
      WBPaper00064130:Beta-Amyloid_24h_downregulated_mRNA
      WBPaper00064762:freezing-thaw_regulated
      WBPaper00065734:unc-25(e156)_upregulated
      WBPaper00066110:Cisplatin_upregulated_diploid
      WBPaper00066110:Doxorubicin_upregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4386_cluster_1_3
      cgc4489_group_16
      WBPaper00027722:Microbacterium_nematophilum_upregulated
      WBPaper00028474:dys-1_upregulated
      WBPaper00028482:PA14_upregulated
      WBPaper00028789:PA14_vs_gacA_upregulated_4hr
      WBPaper00028789:PA14_vs_gacA_upregulated_8hr
      WBPaper00028789:PA14_vs_OP50_upregulated_4hr
      WBPaper00028789:PA14_vs_OP50_upregulated_8hr
      WBPaper00028789:pmk-1_upregulated
      WBPaper00029437:dcr-1_upregulated
      WBPaper00029437:rde-4_upregulated
      WBPaper00031184:acrylamide_downregulated
      WBPaper00031532:Larva_Pan_Neuronal_Depleted
      WBPaper00031832:slr-2_regulated
      WBPaper00032948:StarveUp1
      WBPaper00034661:AgNPs_downregulated
      WBPaper00034757:up_by_oxidative_stress
      WBPaper00035873:dpy-9_regulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00035873:osmotically_regulated
      WBPaper00035891:zip-2(RNAi)_downregulated
      WBPaper00035892:KIM5_vs_OP50_Up
      WBPaper00035892:Y.pestis_regulated
      WBPaper00036130:mir-243_down_regulated
      WBPaper00036286:Pattern_F
      WBPaper00036383:ash-2_L3_regulated
      WBPaper00038060:SUMO-1_downregulated
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00038304:octr-1_regulated
      WBPaper00038462:aging_downregulated
      WBPaper00039792:TempShiftIncrease
      WBPaper00039851:Live_C_albicans_vs_HK_C_albicans
      WBPaper00039851:Live_C_albicans_vs_HK_OP50
      WBPaper00040184:hcf-1up_sir-2.1down_daf-2nc
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00040823:alg-1(gk214)_upregulated
      WBPaper00040876:mir-35_downregulated
      WBPaper00040963:Q100_down
      WBPaper00040963:Q200_down
      WBPaper00040963:TA100_up
      WBPaper00040963:TA200_up
      WBPaper00040963:TA300_up
      WBPaper00041002:HF_3d_0.2mM_Up
      WBPaper00041002:HF_3d_2.0mM_Up
      WBPaper00041002:HQ_3d_2.0mM_Up
      WBPaper00041211:RPW-24_Up
      WBPaper00041267:SpaceFlight_Downregulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041939:control_vs_EtBr-exposed_24h
      WBPaper00041939:control_vs_EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_24h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_24h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00042067:Cu2+_upregulated_WT
      WBPaper00042258:DA1877_upregulated_GravidAdult
      WBPaper00042258:HT115_upregulated_YoungAdult
      WBPaper00042274:tbx-2(bx59)_upregulated
      WBPaper00042574:JU1580_OrsayVirus_upregulated
      WBPaper00044091:Bpseudomallei_induced_2h
      WBPaper00044091:Bpseudomallei_induced_8h
      WBPaper00044091:Bpseudomallei_induced_12h
      WBPaper00046083:pmk-1(km25)_OP50_downregulated
      WBPaper00046548:dafachronic-acid_downregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00048624:hlh-25(ok1710)_upregulated
      WBPaper00048637:lin-35(n745)_starvation_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00049311:AgNO3_regulated
      WBPaper00050520:lagr-1(gk327);hyl-1(ok976)_upregulated
      WBPaper00050650:mBmkTX_upregulated
      WBPaper00050767:Octopamine_induced
      WBPaper00053688:E.faecalis_downregulated
      WBPaper00053688:E.faecium_downregulated
      WBPaper00055435:MUA-AuNP-0.5_upregulated
      WBPaper00055435:MUA-AuNP-3_upregulated
      WBPaper00055899:nitroguanidine_regulated
      [cgc5976]:class_2
      [cgc6390]:Cluster_B
    Interaction: WBInteraction000503189
  Map_info: Map: IV Position: -1.60678 Error: 0.016963
    Positive: Positive_clone (2)
    Pseudo_map_position
  Reference: WBPaper00031070
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene