WormBase Tree Display for Gene: WBGene00023407
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WBGene00023407 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F56D1 | ||||
Identity | Version | 2 | |||||
Name | CGC_name | cex-1 | Person_evidence | WBPerson51 | |||
Sequence_name | F56D1.6 | ||||||
Molecular_name | F56D1.6 | ||||||
F56D1.6.1 | |||||||
CE01974 | |||||||
Other_name | CELE_F56D1.6 | Accession_evidence | NDB | BX284602 | |||
Public_name | cex-1 | ||||||
DB_info | Database | AceView | gene | 2F739 | |||
WormQTL | gene | WBGene00023407 | |||||
WormFlux | gene | WBGene00023407 | |||||
NDB | locus_tag | CELE_F56D1.6 | |||||
Panther | gene | CAEEL|WormBase=WBGene00023407|UniProtKB=Q10131 | |||||
family | PTHR10827 | ||||||
NCBI | gene | 186376 | |||||
RefSeq | protein | NM_062633.2 | |||||
SwissProt | UniProtAcc | Q10131 | |||||
TREEFAM | TREEFAM_ID | TF315183 | |||||
UniProt_GCRP | UniProtAcc | Q10131 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Acquires_merge | WBGene00018962 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cex | ||||||
Allele (18) | |||||||
Strain | WBStrain00033003 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00056184 | ||||||
Ortholog (24) | |||||||
Paralog | WBGene00016965 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00017240 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00019760 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00023408 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
Structured_description | Automated_description | Predicted to enable metal ion binding activity. Expressed in RIML and RIMR. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F56D1.6 | |||||
Corresponding_transcript | F56D1.6.1 | ||||||
Other_sequence (12) | |||||||
Associated_feature | WBsf987886 | ||||||
WBsf987887 | |||||||
WBsf1012230 | |||||||
WBsf221281 | |||||||
WBsf221282 | |||||||
WBsf221283 | |||||||
Experimental_info | RNAi_result | WBRNAi00032953 | Inferred_automatically | RNAi_primary | |||
WBRNAi00015809 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048686 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr3903 | ||||||
Expr6219 | |||||||
Expr12131 | |||||||
Expr12132 | |||||||
Expr1026766 | |||||||
Expr1040128 | |||||||
Expr1152444 | |||||||
Expr2009929 | |||||||
Expr2028169 | |||||||
Drives_construct | WBCnstr00003935 | ||||||
WBCnstr00011736 | |||||||
WBCnstr00020223 | |||||||
WBCnstr00020231 | |||||||
WBCnstr00020882 | |||||||
WBCnstr00023884 | |||||||
Construct_product | WBCnstr00023884 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (241) | |||||||
Interaction (14) | |||||||
Map_info | Map | II | Position | -1.48035 | Error | 0.016417 | |
Positive | Positive_clone | F56D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00011325 | ||||||
WBPaper00025315 | |||||||
WBPaper00028268 | |||||||
WBPaper00044578 | |||||||
WBPaper00063813 | |||||||
WBPaper00065331 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |