WormBase Tree Display for Gene: WBGene00023407
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| WBGene00023407 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F56D1 | ||||||
| Identity | Version | 2 | |||||||
| Name | CGC_name | cex-1 | Person_evidence | WBPerson51 | |||||
| Sequence_name | F56D1.6 | ||||||||
| Molecular_name | F56D1.6 | ||||||||
| F56D1.6.1 | |||||||||
| CE01974 | |||||||||
| Other_name | CELE_F56D1.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | cex-1 | ||||||||
| DB_info | Database | AceView | gene | 2F739 | |||||
| WormQTL | gene | WBGene00023407 | |||||||
| WormFlux | gene | WBGene00023407 | |||||||
| NDB | locus_tag | CELE_F56D1.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00023407|UniProtKB=Q10131 | |||||||
| family | PTHR10827 | ||||||||
| NCBI | gene | 186376 | |||||||
| RefSeq | protein | NM_062633.2 | |||||||
| SwissProt | UniProtAcc | Q10131 | |||||||
| TREEFAM | TREEFAM_ID | TF315183 | |||||||
| UniProt_GCRP | UniProtAcc | Q10131 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 14 Jun 2004 16:22:32 | WBPerson1971 | Event | Created | |||
| 2 | 16 Jul 2004 14:49:15 | WBPerson1971 | Event | Acquires_merge | WBGene00018962 | ||||
| Acquires_merge | WBGene00018962 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cex | ||||||||
| Allele (18) | |||||||||
| Strain | WBStrain00033003 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00056184 | ||||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00016965 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00017240 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019760 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00023408 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| Structured_description | Automated_description | Predicted to enable metal ion binding activity. Expressed in RIML and RIMR. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56D1.6 | |||||||
| Corresponding_transcript | F56D1.6.1 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf987886 | ||||||||
| WBsf987887 | |||||||||
| WBsf1012230 | |||||||||
| WBsf221281 | |||||||||
| WBsf221282 | |||||||||
| WBsf221283 | |||||||||
| Experimental_info | RNAi_result (3) | ||||||||
| Expr_pattern | Expr3903 | ||||||||
| Expr6219 | |||||||||
| Expr12131 | |||||||||
| Expr12132 | |||||||||
| Expr1026766 | |||||||||
| Expr1040128 | |||||||||
| Expr1152444 | |||||||||
| Expr2009929 | |||||||||
| Expr2028169 | |||||||||
| Drives_construct | WBCnstr00003935 | ||||||||
| WBCnstr00011736 | |||||||||
| WBCnstr00020223 | |||||||||
| WBCnstr00020231 | |||||||||
| WBCnstr00020882 | |||||||||
| WBCnstr00023884 | |||||||||
| Construct_product | WBCnstr00023884 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (241) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | II | Position | -1.48035 | Error | 0.016417 | |||
| Positive | Positive_clone | F56D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00011325 | ||||||||
| WBPaper00025315 | |||||||||
| WBPaper00028268 | |||||||||
| WBPaper00044578 | |||||||||
| WBPaper00063813 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
