WormBase Tree Display for Gene: WBGene00022875

WBGene00022875 SMap: S_parent: Sequence: ZK1248
  Identity: Version: 1
    Name: Sequence_name: ZK1248.4
      Molecular_name: ZK1248.4
        ZK1248.4.1
        CE02603
      Other_name: CELE_ZK1248.4 Accession_evidence: NDB BX284602
      Public_name: ZK1248.4
    DB_info: Database: AceView gene 2G109
        WormQTL gene WBGene00022875
        WormFlux gene WBGene00022875
        NDB locus_tag CELE_ZK1248.4
        NCBI gene 173984
        RefSeq protein NM_062753.1
        TrEMBL UniProtAcc G5EEW3
        UniProt_GCRP UniProtAcc G5EEW3
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:06 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01499702
      WBVar01498435
      WBVar01306446
      WBVar01500128
      WBVar00734343
      WBVar00734344
      WBVar02148200
    RNASeq_FPKM (74)
    Ortholog (14)
    Paralog (45)
    Structured_description: Automated_description: Is affected by several genes including daf-2; age-1; and eat-2 based on microarray; RNA-seq; tiling array; and proteomic studies. Is affected by five chemicals including Tunicamycin; Cry5B; and resveratrol based on microarray studies. Is predicted to encode a protein with the following domains: Major sperm protein (MSP) domain; MSP (Major sperm protein) domain; PapD-like superfamily; and Immunoglobulin-like fold. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK1248.4
    Corresponding_transcript: ZK1248.4.1
    Other_sequence (38)
  Experimental_info: RNAi_result: WBRNAi00059194 Inferred_automatically: RNAi_primary
      WBRNAi00021849 Inferred_automatically: RNAi_primary
      WBRNAi00059192 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020481
      Expr1162611
    Drives_construct: WBCnstr00023901
    Construct_product: WBCnstr00023901
    Microarray_results (11)
    Expression_cluster: WBPaper00029047:atx-3_upregulated
      WBPaper00035269:cde-1_regulated
      WBPaper00036231:long-telomeres_downregulated
      WBPaper00038118:aak-2(gt33)_downregulated
      WBPaper00038237:age-1_upregulated_intestine_rescue
      WBPaper00038237:age-1_upregulated_neuron_rescue
      WBPaper00038237:age-1_upregulated_nontransgenic
      WBPaper00038289:oocyte_protein
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00040560:hpl-2_embryo_downregulated
      WBPaper00042194:nhr-114(RNAi)_upregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00045316:prg-1_downregulated_L4
      WBPaper00045571:germline-ablation_upregulated
      WBPaper00049905:Age_variant_expression
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00054996:activated_sperm_CE
      WBPaper00054996:membranous_oraganelle_CE
      WBPaper00054996:unactivated_spermatid_CE
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00055482:Tunicamycin_downregulated
      WBPaper00055971:nhl-2(ok818)_20C_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056167:Cry5B_downregulated
      WBPaper00056471:flcn-1(ok975)_downregulated
      WBPaper00057288:iff-1(RNAi)_upregulated_protein
      WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
      WBPaper00061527:msp-63-msp-33
      WBPaper00061572:oleic-acid-specific_mating_upregulated
      WBPaper00065043:dcap-1(tm3163)_upregulated
      WBPaper00066093:E.coli-purE_upregulated
      cgc4489_group_11
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00031184:acrylamide_upregulated
      WBPaper00045673:colistin_downregulated
      [cgc6390]:Cluster_D
      [cgc6390]:spermatogenesis-enriched
    Interaction (189)
  Map_info: Positive: Positive_clone: ZK1248 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -0.915838
  Method: Gene