WormBase Tree Display for Variation: WBVar01306446
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| WBVar01306446 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01306446 | |||||
| Other_name | cewivar00355511 | ||||||
| CE02603:p.Ter78TyrextTer? | |||||||
| ZK1248.4.1:c.234G>T | |||||||
| HGVSg | CHROMOSOME_II:g.5818831G>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | ZK1248 | |||
| Flanking_sequences | GGAGATGGTATGGTTCGCCGCAAGAATCTGCCAATCGAATACAACCCATA | GTTCCTTGTAAAATAAATATTGTTTAATGCCTGTGTTGTTTCTTTCTGTA | |||||
| Mapping_target | ZK1248 | ||||||
| Type_of_mutation | Substitution | g | T | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
| WGS_De_Bono | |||||||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| DB_info | Database | dbSNP_ss | ss | 539164082 | |||
| Status | Live | ||||||
| Affects | Gene | WBGene00022875 | |||||
| Transcript | ZK1248.4.1 | VEP_consequence | stop_lost | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | ZK1248.4.1:c.234G>T | ||||||
| HGVSp | CE02603:p.Ter78TyrextTer? | ||||||
| cDNA_position | 234 | ||||||
| CDS_position | 234 | ||||||
| Protein_position | 78 | ||||||
| Exon_number | 1/1 | ||||||
| Codon_change | taG/taT | ||||||
| Amino_acid_change | */Y | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
