WormBase Tree Display for CDS: ZK1248.4
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| ZK1248.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | ZK1248 | |||
| Structure | Source_exons | 1 | 234 | |||
| DB_info | Database | TrEMBL | UniProtAcc | G5EEW3 | ||
| UniProt | UniProtAcc | G5EEW3 | ||||
| UniProt_GCRP | UniProtAcc | G5EEW3 | ||||
| AlphaFold | entry | G5EEW3 | ||||
| NCBI_protein | GI_number | GI:351064218 | ||||
| Protein_id | CHROMOSOME_II | CCD72506 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF00635 (MSP (Major sperm protein) domain); contains similarity to Interpro domains IPR000535 (Major sperm protein (MSP) domain), IPR008962 (PapD-like superfamily), IPR013783 (Immunoglobulin-like fold) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00022875 | ||||
| Corresponding_transcript | ZK1248.4.1 | |||||
| Corresponding_protein | CE02603 | |||||
| Corresponding_PCR_product | cenix:236-b4 | |||||
| mv_ZK1248.4 | ||||||
| sjj_ZK1248.4 | ||||||
| smd_ZK1248.4 | ||||||
| Corresponding_oligo_set | A_12_P110792 | |||||
| Aff_ZK1248.4 | ||||||
| GPL14144_ZK1248.4_174-233_0.823_2_A | ||||||
| GPL19516_CGZ0056362 | ||||||
| GPL21109_ZK1248.4 | ||||||
| GPL8304_CE_WBGene00022875_A | ||||||
| GPL8673_ZK1248_4P00043 | ||||||
| GPL8673_ZK1248_4P00112 | ||||||
| GPL8673_ZK1248_4P00175 | ||||||
| Matching_cDNA | male_Nanopore_Roach_157148 | |||||
| male_Nanopore_Roach_158184 | ||||||
| young_adult_Nanopore_Roach_131253 | ||||||
| RNAi_result | WBRNAi00059194 | |||||
| WBRNAi00021849 | ||||||
| WBRNAi00059192 | ||||||
| Microarray_results (11) | ||||||
| Brief_identification | MSP domain-containing protein | Accession_evidence | UniProt | TR:G5EEW3 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
