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WormBase Tree Display for Gene: WBGene00022798

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Name Class

WBGene00022798SMapS_parentSequenceZK688
IdentityVersion2
NameCGC_namefahd-1Person_evidenceWBPerson649
Sequence_nameZK688.3
Molecular_nameZK688.3
ZK688.3.1
CE00461
ZK688.3.2
Other_nameCELE_ZK688.3Accession_evidenceNDBBX284603
Public_namefahd-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:06WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
229 Jun 2012 17:01:34WBPerson2970Name_changeCGC_namefahd-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfahd
Allele (32)
RNASeq_FPKM (74)
GO_annotation00043901
00043902
00043903
00043904
00043905
00126774
Ortholog (36)
ParalogWBGene00019620Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable acetylpyruvate hydrolase activity. Located in mitochondrion. Expressed in body wall musculature; excretory canal; pharynx; and vulva. Is an ortholog of human FAHD1 (fumarylacetoacetate hydrolase domain containing 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZK688.3
Corresponding_transcriptZK688.3.1
ZK688.3.2
Other_sequence (48)
Associated_featureWBsf645365
WBsf645366
WBsf645367
WBsf659205
WBsf993186
WBsf1015335
WBsf225295
WBsf225296
Experimental_infoRNAi_resultWBRNAi00022134Inferred_automaticallyRNAi_primary
WBRNAi00059671Inferred_automaticallyRNAi_primary
WBRNAi00072321Inferred_automaticallyRNAi_primary
WBRNAi00110231Inferred_automaticallyRNAi_primary
WBRNAi00038422Inferred_automaticallyRNAi_primary
WBRNAi00075838Inferred_automaticallyRNAi_primary
WBRNAi00005206Inferred_automaticallyRNAi_primary
WBRNAi00110229Inferred_automaticallyRNAi_primary
WBRNAi00072322Inferred_automaticallyRNAi_primary
Expr_patternExpr12433
Expr1022392
Expr1040086
Expr1163086
Expr2011418
Expr2029655
Drives_constructWBCnstr00023965
Construct_productWBCnstr00023965
AntibodyWBAntibody00002648
WBAntibody00002874
Microarray_results (20)
Expression_clusterWBPaper00032528:L3_enriched
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00035073:mitochondria_protein
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044736:flat_dev_expression
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_upregulated
WBPaper00046497:B.thuringiensis_upregulated_protein
WBPaper00048988:neuron_expressed
WBPaper00050344:AFD-neuron_enriched
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:intestine_enriched
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053792:Ochrobactrum_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056826:SGP_biased
WBPaper00057006:DietaryRestriction_upregulated
WBPaper00057041:spc-1(cas971)_downregulated
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00059471:EGL-43_interacting
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061527:F45H10.2-R53.4_21676
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064071:NHR-49_interacting
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065749:Heat-Shock_upregulated_endu-2(tm4977)
WBPaper00066085:sin-3(syb2172)_downregulated
WBPaper00066085:sin-3(tm1276)_downregulated
cgc4386_cluster_2_3
WBPaper00025032:cluster_56
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030839:Embryo_Pan_Neuronal
WBPaper00030985:Photorhabdus_luminescens_downregulated
WBPaper00031003:hlh_1_enriched
WBPaper00032165:differentially_expressed_with_age_medoid_7
WBPaper00032948:StarveUp3
WBPaper00035560:ahr-1_downregulated
WBPaper00036123:Fluoranthene_regulated
WBPaper00040426:CYD-1_CDK-4_downregulated
WBPaper00040963:Q200_up
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041174:environmental
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00048637:lin-35(n745)_starvation_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
Interaction (70)
Map_infoMapIIIPosition-0.508765
PositivePositive_cloneZK688Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00031865
WBPaper00038491
WBPaper00043209
WBPaper00048422
WBPaper00055090
WBPaper00057194
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene