WormBase Tree Display for Gene: WBGene00022789
expand all nodes | collapse all nodes | view schema
| WBGene00022789 | SMap | S_parent | Sequence | ZK682 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lron-2 | Person_evidence | WBPerson637 | |||||
| Sequence_name | ZK682.5 | ||||||||
| Molecular_name | ZK682.5 | ||||||||
| ZK682.5.1 | |||||||||
| CE05103 | |||||||||
| Other_name | CELE_ZK682.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | lron-2 | ||||||||
| DB_info | Database | AceView | gene | 5J766 | |||||
| WormQTL | gene | WBGene00022789 | |||||||
| WormFlux | gene | WBGene00022789 | |||||||
| NDB | locus_tag | CELE_ZK682.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022789|UniProtKB=Q23580 | |||||||
| family | PTHR24366 | ||||||||
| NCBI | gene | 179309 | |||||||
| RefSeq | protein | NM_073001.7 | |||||||
| TREEFAM | TREEFAM_ID | TF318447 | |||||||
| TrEMBL | UniProtAcc | Q23580 | |||||||
| UniProt_GCRP | UniProtAcc | Q23580 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Dec 2011 15:47:23 | WBPerson2970 | Name_change | CGC_name | lron-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lron | ||||||||
| Allele | WBVar02136843 | ||||||||
| WBVar00213582 | |||||||||
| WBVar00213583 | |||||||||
| WBVar00213584 | |||||||||
| WBVar01499903 | |||||||||
| WBVar02156334 | |||||||||
| WBVar01461144 | |||||||||
| WBVar01461145 | |||||||||
| WBVar01500129 | |||||||||
| WBVar00248590 | |||||||||
| WBVar00466269 | |||||||||
| WBVar00466270 | |||||||||
| WBVar00466271 | |||||||||
| WBVar00466272 | |||||||||
| WBVar00466273 | |||||||||
| WBVar01499419 | |||||||||
| WBVar01499420 | |||||||||
| WBVar01499056 | |||||||||
| WBVar01499243 | |||||||||
| WBVar01499244 | |||||||||
| WBVar00278286 | |||||||||
| WBVar01035691 | |||||||||
| WBVar01035692 | |||||||||
| WBVar01035693 | |||||||||
| WBVar01035694 | |||||||||
| WBVar01035695 | |||||||||
| WBVar01035696 | |||||||||
| WBVar01035697 | |||||||||
| WBVar01035698 | |||||||||
| WBVar01035699 | |||||||||
| WBVar01035700 | |||||||||
| WBVar01035701 | |||||||||
| WBVar01035702 | |||||||||
| WBVar01035703 | |||||||||
| WBVar01035704 | |||||||||
| WBVar01035705 | |||||||||
| WBVar01035706 | |||||||||
| WBVar01035707 | |||||||||
| WBVar01499316 | |||||||||
| WBVar01035708 | |||||||||
| WBVar01035709 | |||||||||
| WBVar01689647 | |||||||||
| WBVar01035710 | |||||||||
| WBVar01689648 | |||||||||
| WBVar01689649 | |||||||||
| WBVar01035711 | |||||||||
| WBVar01035712 | |||||||||
| WBVar01035713 | |||||||||
| WBVar01035714 | |||||||||
| WBVar01035715 | |||||||||
| WBVar01035716 | |||||||||
| WBVar01035717 | |||||||||
| WBVar01035718 | |||||||||
| WBVar01035719 | |||||||||
| WBVar01035720 | |||||||||
| WBVar01035721 | |||||||||
| WBVar01035722 | |||||||||
| WBVar01035723 | |||||||||
| WBVar01742666 | |||||||||
| Strain | WBStrain00051111 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00079005 | ||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00000998 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00006366 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00007764 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00008093 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00008977 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003915 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006593 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00011971 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020649 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in tail. Is an ortholog of human LRRC15 (leucine rich repeat containing 15). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK682.5 | |||||||
| Corresponding_transcript | ZK682.5.1 | ||||||||
| Other_sequence (13) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00027093 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00073443 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00073444 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038418 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022130 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059661 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027566 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9902 | ||||||||
| Expr1026813 | |||||||||
| Expr1040079 | |||||||||
| Expr1163073 | |||||||||
| Expr2013275 | |||||||||
| Expr2031506 | |||||||||
| Drives_construct | WBCnstr00014388 | ||||||||
| WBCnstr00023974 | |||||||||
| Construct_product | WBCnstr00014388 | ||||||||
| WBCnstr00023974 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (241) | |||||||||
| Interaction (68) | |||||||||
| Map_info | Map | V | Position | 1.97515 | |||||
| Positive | Positive_clone | ZK682 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
