WormBase Tree Display for Gene: WBGene00011971
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| WBGene00011971 | SMap | S_parent | Sequence | T23G11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lron-9 | Person_evidence | WBPerson637 | |||||
| Sequence_name | T23G11.6 | ||||||||
| Molecular_name | T23G11.6a | ||||||||
| T23G11.6a.1 | |||||||||
| CE14102 | |||||||||
| T23G11.6b | |||||||||
| CE38226 | |||||||||
| T23G11.6c | |||||||||
| CE41025 | |||||||||
| T23G11.6b.1 | |||||||||
| T23G11.6c.1 | |||||||||
| T23G11.6d | |||||||||
| Other_name | CELE_T23G11.6 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | lron-9 | ||||||||
| DB_info | Database | AceView | gene | 1I262 | |||||
| WormQTL | gene | WBGene00011971 | |||||||
| WormFlux | gene | WBGene00011971 | |||||||
| NDB | locus_tag | CELE_T23G11.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011971|UniProtKB=O02329 | |||||||
| family | PTHR45617 | ||||||||
| NCBI | gene | 172529 | |||||||
| RefSeq | protein | NR_050271.1 | |||||||
| NM_001129050.4 | |||||||||
| NM_001026467.6 | |||||||||
| NM_001083146.7 | |||||||||
| TrEMBL | UniProtAcc | A5JYW0 | |||||||
| O02329 | |||||||||
| Q58A95 | |||||||||
| UniProt_GCRP | UniProtAcc | O02329 | |||||||
| RNAcentral | URSid | URS00001B6B4B | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Dec 2011 15:47:23 | WBPerson2970 | Name_change | CGC_name | lron-9 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lron | ||||||||
| Allele (47) | |||||||||
| Strain | WBStrain00037917 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004776 | ||||||||
| Ortholog (29) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in head neurons; muscle cell; seam cell; and ventral cord neurons. Is an ortholog of human LRG1 (leucine rich alpha-2-glycoprotein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T23G11.6a | |||||||
| T23G11.6b | |||||||||
| T23G11.6c | |||||||||
| Corresponding_CDS_history | T23G11.6d:wp205 | ||||||||
| Corresponding_transcript | T23G11.6d | ||||||||
| T23G11.6a.1 | |||||||||
| T23G11.6b.1 | |||||||||
| T23G11.6c.1 | |||||||||
| Other_sequence (12) | |||||||||
| Associated_feature (15) | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr9905 | ||||||||
| Expr1018385 | |||||||||
| Expr1035288 | |||||||||
| Expr1157513 | |||||||||
| Expr2013282 | |||||||||
| Expr2031513 | |||||||||
| Drives_construct | WBCnstr00014391 | ||||||||
| WBCnstr00030238 | |||||||||
| Construct_product | WBCnstr00014391 | ||||||||
| WBCnstr00030238 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (179) | |||||||||
| Interaction (71) | |||||||||
| Map_info | Map | I | Position | 2.23886 | |||||
| Positive | Positive_clone | T23G11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060786 | |||||||||
| WBPaper00062715 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
