WormBase Tree Display for Gene: WBGene00021902

WBGene00021902 SMap: S_parent: Sequence: Y54H5A
  Identity: Version: 2
    Name: CGC_name: oxy-4 Paper_evidence: WBPaper00033040
          Person_evidence: WBPerson264
      Sequence_name: Y54H5A.4
      Molecular_name: Y54H5A.4
        Y54H5A.4.1
        CE29883
      Other_name: CELE_Y54H5A.4 Accession_evidence: NDB BX284603
      Public_name: oxy-4
    DB_info: Database: AceView gene 3G244
            3G246
        WormQTL gene WBGene00021902
        WormFlux gene WBGene00021902
        NDB locus_tag CELE_Y54H5A.4
        Panther gene CAEEL|WormBase=WBGene00021902|UniProtKB=Q9N392
          family PTHR11615
        NCBI gene 175702
        RefSeq protein NM_065691.8
        SwissProt UniProtAcc Q9N392
        TREEFAM TREEFAM_ID TF106273
        UniProt_GCRP UniProtAcc Q9N392
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 21 Apr 2009 16:04:55 WBPerson9133 Name_change: CGC_name: oxy-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: oxy
    Allele (37)
    RNASeq_FPKM (74)
    GO_annotation: 00093617
      00093618
      00093619
      00093620
      00093621
      00093622
    Contained_in_operon: CEOP3260
    Ortholog (43)
    Paralog: WBGene00021562 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable 4 iron, 4 sulfur cluster binding activity and metal ion binding activity. Predicted to be involved in iron-sulfur cluster assembly. Predicted to be part of CIA complex. Is an ortholog of human CIAO3 (cytosolic iron-sulfur assembly component 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y54H5A.4
    Corresponding_CDS_history: Y54H5A.4:wp100
      Y54H5A.4:wp104
    Corresponding_transcript: Y54H5A.4.1
    Other_sequence (30)
    Associated_feature: WBsf666890
      WBsf666891
      WBsf226640
  Experimental_info: RNAi_result: WBRNAi00033620 Inferred_automatically: RNAi_primary
      WBRNAi00057483 Inferred_automatically: RNAi_primary
      WBRNAi00057492 Inferred_automatically: RNAi_primary
      WBRNAi00007085 Inferred_automatically: RNAi_primary
      WBRNAi00057482 Inferred_automatically: RNAi_primary
      WBRNAi00078165 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017419
      Expr1039619
      Expr1160930
      Expr2014671
      Expr2032904
    Drives_construct: WBCnstr00024407
    Construct_product: WBCnstr00024407
    Microarray_results (14)
    Expression_cluster (72)
    Interaction: WBInteraction000118365
      WBInteraction000186156
      WBInteraction000195512
      WBInteraction000460979
      WBInteraction000547735
      WBInteraction000576337
    WBProcess: WBbiopr:00000001
      WBbiopr:00000065
  Map_info: Map: III Position: -2.05115 Error: 0.001553
    Positive: Positive_clone: Y54H5A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00033040
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene