WormBase Tree Display for Gene: WBGene00021826

WBGene00021826 SMap: S_parent: Sequence: Y54E10A
  Identity: Version: 2
    Name: CGC_name: txl-1 Person_evidence: WBPerson3046
      Sequence_name: Y54E10A.3
      Molecular_name: Y54E10A.3
        Y54E10A.3.1
        CE24447
      Other_name: txl Accession_evidence: EMBL AF143405
              AF143900
        CELE_Y54E10A.3 Accession_evidence: NDB BX284601
      Public_name: txl-1
    DB_info: Database: AceView gene 1D801
        WormQTL gene WBGene00021826
        WormFlux gene WBGene00021826
        NDB locus_tag CELE_Y54E10A.3
        Panther gene CAEEL|WormBase=WBGene00021826|UniProtKB=G5EES9
          family PTHR46115
        NCBI gene 171897
        RefSeq protein NM_058726.8
        TREEFAM TREEFAM_ID TF314399
        TrEMBL UniProtAcc G5EES9
        UniProt_GCRP UniProtAcc G5EES9
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 03 Mar 2014 14:12:13 WBPerson2970 Name_change: CGC_name: txl-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: txl
    Allele (83)
    Strain: WBStrain00032532
    RNASeq_FPKM (74)
    GO_annotation: 00016836
      00016837
    Contained_in_operon: CEOP1090
    Ortholog (33)
    Paralog: WBGene00021933 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00007099 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015062 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00020917 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021548 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: txl-1 encodes a C. elegans thioredoxin-like protein orthologous to mammalian TXNL1. Curator_confirmed: WBPerson1843
          Date_last_updated: 23 Mar 2014 00:00:00
      Automated_description: Predicted to enable protein-disulfide reductase activity. Predicted to be located in cytosol. Is an ortholog of human TXNL1 (thioredoxin like 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y54E10A.3
    Corresponding_transcript: Y54E10A.3.1
    Other_sequence (63)
    Associated_feature: WBsf656107
      WBsf217378
      WBsf217379
  Experimental_info: RNAi_result: WBRNAi00061937 Inferred_automatically: RNAi_primary
      WBRNAi00057348 Inferred_automatically: RNAi_primary
      WBRNAi00037455 Inferred_automatically: RNAi_primary
      WBRNAi00116456 Inferred_automatically: RNAi_primary
      WBRNAi00004726 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013977
      Expr1039573
      Expr1160784
      Expr2017683
      Expr2035821
    Microarray_results (21)
    Expression_cluster (138)
    Interaction (13)
  Map_info: Map: I Position: -4.45482
    Positive: Positive_clone: Y54E10A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00041408
    WBPaper00055090
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene