WormBase Tree Display for Gene: WBGene00021933
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| WBGene00021933 | SMap | S_parent | Sequence | Y55F3AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y55F3AR.2 | |||||||
| Molecular_name | Y55F3AR.2 | ||||||||
| Y55F3AR.2.1 | |||||||||
| CE34418 | |||||||||
| Other_name | CELE_Y55F3AR.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y55F3AR.2 | ||||||||
| DB_info | Database | AceView | gene | 4B849 | |||||
| WormQTL | gene | WBGene00021933 | |||||||
| WormFlux | gene | WBGene00021933 | |||||||
| NDB | locus_tag | CELE_Y55F3AR.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021933|UniProtKB=Q9N357 | |||||||
| family | PTHR46115 | ||||||||
| NCBI | gene | 176929 | |||||||
| RefSeq | protein | NM_067635.5 | |||||||
| TREEFAM | TREEFAM_ID | TF314399 | |||||||
| TrEMBL | UniProtAcc | Q9N357 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N357 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (59) | |||||||||
| Strain | WBStrain00036462 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00093489 | ||||||||
| 00093490 | |||||||||
| 00093491 | |||||||||
| Contained_in_operon | CEOP4048 | ||||||||
| Ortholog (17) | |||||||||
| Paralog | WBGene00021826 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00007099 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015062 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020917 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021548 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable protein-disulfide reductase activity. Predicted to be located in cytosol. Human ortholog(s) of this gene implicated in male infertility. Is an ortholog of human TXNDC8 (thioredoxin domain containing 8). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:12336 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:31454) | ||||
| Molecular_info | Corresponding_CDS | Y55F3AR.2 | |||||||
| Corresponding_CDS_history | Y55F3AR.2:wp102 | ||||||||
| Corresponding_transcript | Y55F3AR.2.1 | ||||||||
| Other_sequence | CJC14392_1 | ||||||||
| CRC03424_1 | |||||||||
| PPC09230_1 | |||||||||
| PTC00266_1 | |||||||||
| CR06495 | |||||||||
| CBC04257_1 | |||||||||
| PT00062 | |||||||||
| CRC11559_1 | |||||||||
| Associated_feature | WBsf645781 | ||||||||
| WBsf981668 | |||||||||
| WBsf995344 | |||||||||
| WBsf227910 | |||||||||
| WBsf227911 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037523 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057537 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025560 | ||||||||
| Expr1039645 | |||||||||
| Expr1160971 | |||||||||
| Expr2007986 | |||||||||
| Expr2026228 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (83) | |||||||||
| Interaction | WBInteraction000046328 | ||||||||
| WBInteraction000216183 | |||||||||
| WBInteraction000328612 | |||||||||
| WBInteraction000363555 | |||||||||
| WBInteraction000462274 | |||||||||
| WBInteraction000469764 | |||||||||
| WBInteraction000473139 | |||||||||
| WBInteraction000559649 | |||||||||
| WBInteraction000570921 | |||||||||
| WBInteraction000585654 | |||||||||
| Map_info | Positive | Positive_clone | Y55F3AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -22.0932 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041408 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
