WormBase Tree Display for Gene: WBGene00021495

WBGene00021495 SMap: S_parent: Sequence: Y40C5A
  Identity: Version: 2
    Name: CGC_name: sqst-2 Paper_evidence: WBPaper00042170
          Person_evidence: WBPerson716
      Sequence_name: Y40C5A.1
      Molecular_name: Y40C5A.1
        Y40C5A.1.1
        CE35366
      Other_name: CELE_Y40C5A.1 Accession_evidence: NDB BX284604
      Public_name: sqst-2
    DB_info: Database: AceView gene 4I92
        WormQTL gene WBGene00021495
        WormFlux gene WBGene00021495
        NDB locus_tag CELE_Y40C5A.1
        Panther gene CAEEL|WormBase=WBGene00021495|UniProtKB=Q9N3Z0
          family PTHR15090
        NCBI gene 189791
        RefSeq protein NM_068770.7
        TREEFAM TREEFAM_ID TF317066
        TrEMBL UniProtAcc Q9N3Z0
        UniProt_GCRP UniProtAcc Q9N3Z0
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 05 Apr 2013 16:46:51 WBPerson2970 Name_change: CGC_name: sqst-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sqst
    Allele (19)
    RNASeq_FPKM (74)
    GO_annotation: 00094098
      00094099
      00094100
      00094101
      00094102
      00094103
      00094104
      00094105
      00094106
      00125834
    Ortholog (15)
    Paralog: WBGene00011737 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012067 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012516 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00015552 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable K63-linked polyubiquitin modification-dependent protein binding activity and protein kinase C binding activity. Predicted to be involved in aggrephagy; endosome organization; and mitophagy. Predicted to be located in aggresome and amphisome. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y40C5A.1
    Corresponding_CDS_history: Y40C5A.1:wp105
    Corresponding_transcript: Y40C5A.1.1
    Associated_feature: WBsf230254
      WBsf230255
      WBsf230256
      WBsf230257
      WBsf230258
  Experimental_info: RNAi_result: WBRNAi00036980 Inferred_automatically: RNAi_primary
      WBRNAi00056323 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019094
      Expr1159811
      Expr2016112
      Expr2034347
    Drives_construct: WBCnstr00024528
    Construct_product: WBCnstr00024528
    Microarray_results (18)
    Expression_cluster (131)
    Interaction (18)
  Map_info: Map: IV Position: 3.32394
    Positive: Positive_clone: Y40C5A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00056693
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene