WormBase Tree Display for Gene: WBGene00021495
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WBGene00021495 | SMap | S_parent | Sequence | Y40C5A | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | sqst | |||||
Allele (19) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00094098 | |||||
00094099 | ||||||
00094100 | ||||||
00094101 | ||||||
00094102 | ||||||
00094103 | ||||||
00094104 | ||||||
00094105 | ||||||
00094106 | ||||||
00125834 | ||||||
Ortholog (15) | ||||||
Paralog | WBGene00011737 | Caenorhabditis elegans | From_analysis | Panther | ||
WormBase-Compara | ||||||
WBGene00012067 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00012516 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00015552 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable K63-linked polyubiquitin modification-dependent protein binding activity and protein kinase C binding activity. Predicted to be involved in aggrephagy; endosome organization; and mitophagy. Predicted to be located in aggresome and amphisome. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y40C5A.1 | ||||
Corresponding_CDS_history | Y40C5A.1:wp105 | |||||
Corresponding_transcript | Y40C5A.1.1 | |||||
Associated_feature | WBsf230254 | |||||
WBsf230255 | ||||||
WBsf230256 | ||||||
WBsf230257 | ||||||
WBsf230258 | ||||||
Experimental_info | RNAi_result | WBRNAi00036980 | Inferred_automatically | RNAi_primary | ||
WBRNAi00056323 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1019094 | |||||
Expr1159811 | ||||||
Expr2016112 | ||||||
Expr2034347 | ||||||
Drives_construct | WBCnstr00024528 | |||||
Construct_product | WBCnstr00024528 | |||||
Microarray_results (18) | ||||||
Expression_cluster (131) | ||||||
Interaction (18) | ||||||
Map_info | Map | IV | Position | 3.32394 | ||
Positive | Positive_clone | Y40C5A | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00056693 | |||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |