WormBase Tree Display for Gene: WBGene00015552

WBGene00015552 SMap: S_parent: Sequence: C06G3
  Identity: Version: 2
    Name: CGC_name: gldi-4 Person_evidence: WBPerson6609
            WBPerson1816
      Sequence_name: C06G3.6
      Molecular_name: C06G3.6
        C06G3.6.1
        CE07982
        C06G3.6.2
      Other_name: CELE_C06G3.6 Accession_evidence: NDB BX284604
      Public_name: gldi-4
    DB_info: Database: AceView gene 4H783
        WormQTL gene WBGene00015552
        WormFlux gene WBGene00015552
        NDB locus_tag CELE_C06G3.6
        Panther gene CAEEL|WormBase=WBGene00015552|UniProtKB=Q17746
          family PTHR15090
        NCBI gene 177467
        RefSeq protein NM_068685.8
        TrEMBL UniProtAcc Q17746
        UniProt_GCRP UniProtAcc Q17746
        OMIM gene 601530
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 05 May 2023 12:43:53 WBPerson51134 Name_change: CGC_name: gldi-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gldi
    Allele (30)
    RNASeq_FPKM (74)
    GO_annotation (13)
    Ortholog (19)
    Paralog: WBGene00011737 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012067 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012516 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021495 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable K63-linked polyubiquitin modification-dependent protein binding activity and protein kinase C binding activity. Predicted to be involved in aggrephagy; endosome organization; and mitophagy. Predicted to be located in aggresome and amphisome. Human ortholog(s) of this gene implicated in Paget's disease of bone 3; distal myopathy with rimmed vacuoles; and neurodegenerative disease (multiple). Is an ortholog of human SQSTM1 (sequestosome 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0081366 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11280)
      DOID:0110068 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11280)
      DOID:0081363 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11280)
      DOID:5408 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11280)
      DOID:0081364 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11280)
  Molecular_info: Corresponding_CDS: C06G3.6
    Corresponding_transcript: C06G3.6.1
      C06G3.6.2
    Other_sequence: PPC14695_1
      CRC07054_1
      CR03421
    Associated_feature: WBsf646058
      WBsf659792
  Experimental_info: RNAi_result: WBRNAi00000578 Inferred_automatically: RNAi_primary
      WBRNAi00028595 Inferred_automatically: RNAi_primary
      WBRNAi00091188 Inferred_automatically: RNAi_primary
      WBRNAi00010342 Inferred_automatically: RNAi_primary
      WBRNAi00091189 Inferred_automatically: RNAi_primary
      WBRNAi00090962 Inferred_automatically: RNAi_primary
      WBRNAi00039938 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023085
      Expr1036660
      Expr1144012
      Expr2000544
      Expr2018770
    Drives_construct: WBCnstr00028757
    Construct_product: WBCnstr00028757
    Microarray_results (17)
    Expression_cluster (141)
    Interaction (56)
  Map_info: Map: IV Position: 3.27714
    Positive: Positive_clone: C06G3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene