WormBase Tree Display for Gene: WBGene00021397

WBGene00021397 SMap: S_parent: Sequence: Y38C1AA
  Identity: Version: 1
    Name: Sequence_name: Y38C1AA.6
      Molecular_name: Y38C1AA.6
        Y38C1AA.6.1
        CE39821
      Other_name: CELE_Y38C1AA.6 Accession_evidence: NDB BX284604
      Public_name: Y38C1AA.6
    DB_info: Database: AceView gene 4A917
        WormQTL gene WBGene00021397
        WormFlux gene WBGene00021397
        NDB locus_tag CELE_Y38C1AA.6
        NCBI gene 189640
        RefSeq protein NM_001392239.1
        TREEFAM TREEFAM_ID TF351241
        TrEMBL UniProtAcc Q9N430
        UniProt_GCRP UniProtAcc Q9N430
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (33)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP4645
    Ortholog: WBGene00153992 Caenorhabditis brenneri From_analysis: OMA
      WBGene00040475 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00087698 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CSP26.g14487 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g14488 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP40.g12730 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g12731 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g12732 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g12733 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g12734 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g12735 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g12736 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_IV.g12995 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_IV.g13013 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_IV.g13014 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_IV.g13015 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_IV.g13016 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00466.g11737 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00466.g11738 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_01389.g20583 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12710 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_16560 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_16561 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_013326 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_013327 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_020827 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_30287600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_30287700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_30287810 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g9452 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00063910 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00063911 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00073284 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00078684 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00082000 Caenorhabditis remanei From_analysis: WormBase-Compara
    Paralog: WBGene00007816 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00008266 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00008267 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00008269 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00009077 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00044085 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
      WBGene00022838 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00219750 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable metal ion binding activity. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y38C1AA.6
    Corresponding_CDS_history: Y38C1AA.6:wp154
    Corresponding_transcript: Y38C1AA.6.1
    Other_sequence: GO239245.1
  Experimental_info: RNAi_result: WBRNAi00079738 Inferred_automatically: RNAi_primary
      WBRNAi00079554 Inferred_automatically: RNAi_primary
      WBRNAi00079508 Inferred_automatically: RNAi_primary
      WBRNAi00079784 Inferred_automatically: RNAi_primary
      WBRNAi00079830 Inferred_automatically: RNAi_primary
      WBRNAi00079692 Inferred_automatically: RNAi_primary
      WBRNAi00079646 Inferred_automatically: RNAi_primary
      WBRNAi00055988 Inferred_automatically: RNAi_primary
      WBRNAi00079600 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021806
      Expr1159507
      Expr2007293
      Expr2025526
    Microarray_results (15)
    Expression_cluster (124)
    Interaction: WBInteraction000051066
      WBInteraction000051112
      WBInteraction000051158
      WBInteraction000051204
      WBInteraction000051250
      WBInteraction000051296
      WBInteraction000051342
  Map_info: Positive: Positive_clone: Y38C1AA Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV -26.8825
  Reference: WBPaper00027315
  Method: Gene