WormBase Tree Display for Gene: WBGene00008266
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| WBGene00008266 | SMap | S_parent | Sequence | C53A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rike-1 | Person_evidence | WBPerson2116 | |||||
| Curator_confirmed | WBPerson21950 | ||||||||
| Laboratory_evidence | HJZ | ||||||||
| Sequence_name | C53A5.6 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_C53A5.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | rike-1 | ||||||||
| DB_info | Database | AceView | gene | 5P24 | |||||
| WormQTL | gene | WBGene00008266 | |||||||
| WormFlux | gene | WBGene00008266 | |||||||
| NDB | locus_tag | CELE_C53A5.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008266|UniProtKB=D5MCU1 | |||||||
| family | PTHR24412 | ||||||||
| NCBI | gene | 183737 | |||||||
| RefSeq | protein | NM_001420565.1 | |||||||
| NM_001392657.1 | |||||||||
| NM_001420564.1 | |||||||||
| NM_001269668.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF351241 | |||||||
| TrEMBL | UniProtAcc | A0A9J5I4G4 | |||||||
| A0A9J5DGE9 | |||||||||
| D5MCU1 | |||||||||
| O17698 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A9J5DGE9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Jun 2022 09:03:36 | WBPerson21950 | Name_change | CGC_name | rike-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rike | ||||||||
| Allele (100) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (63) | |||||||||
| Paralog (15) | |||||||||
| Structured_description | Automated_description | Predicted to enable metal ion binding activity. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C53A5.6a | |||||||
| C53A5.6b | |||||||||
| C53A5.6c | |||||||||
| C53A5.6d | |||||||||
| Corresponding_transcript | C53A5.6a.1 | ||||||||
| C53A5.6b.1 | |||||||||
| C53A5.6c.1 | |||||||||
| C53A5.6d.1 | |||||||||
| Other_sequence | CR04823 | ||||||||
| CRC09637_1 | |||||||||
| Associated_feature | WBsf653396 | ||||||||
| WBsf653397 | |||||||||
| WBsf1002054 | |||||||||
| WBsf1002055 | |||||||||
| WBsf1020866 | |||||||||
| WBsf1020867 | |||||||||
| Experimental_info | RNAi_result (20) | ||||||||
| Expr_pattern | Expr1016615 | ||||||||
| Expr1033590 | |||||||||
| Expr1147029 | |||||||||
| Expr2001879 | |||||||||
| Expr2020105 | |||||||||
| Drives_construct | WBCnstr00033101 | ||||||||
| Construct_product | WBCnstr00033101 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (90) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | V | Position | 6.47667 | |||||
| Positive | Positive_clone | C53A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027315 | ||||||||
| WBPaper00029085 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064031 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
