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WormBase Tree Display for Gene: WBGene00020917

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Name Class

WBGene00020917SMapS_parentSequenceW01B11
IdentityVersion1
NameSequence_nameW01B11.6
Molecular_nameW01B11.6
W01B11.6.1
CE26952
Other_nameCELE_W01B11.6Accession_evidenceNDBBX284601
Public_nameW01B11.6
DB_infoDatabaseAceViewgene1D862
WormQTLgeneWBGene00020917
WormFluxgeneWBGene00020917
NDBlocus_tagCELE_W01B11.6
PanthergeneCAEEL|WormBase=WBGene00020917|UniProtKB=O45017
familyPTHR10438
NCBIgene171903
RefSeqproteinNM_058738.7
TrEMBLUniProtAccO45017
UniProt_GCRPUniProtAccO45017
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (31)
RNASeq_FPKM (74)
OrthologWBGene00057670Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00122159Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00056421Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00123140Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00073211Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00035341Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00056420Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00136640Caenorhabditis japonicaFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00141214Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00160914Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00216497Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00153607Caenorhabditis brenneriFrom_analysisInparanoid_8
CBOVI.g10220Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g17685Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g3343Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g1791Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g8371Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9590Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10971Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g24881Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g23520Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-W01B11.6Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold627.g6806Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00181.g6456Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_13913Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_002103Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_10174000Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g489Caenorhabditis elegansFrom_analysisWormBase-Compara
HGNC:16470Homo sapiensFrom_analysisEnsEMBL-Compara
Panther
HGNC:31454Homo sapiensFrom_analysisEnsEMBL-Compara
Panther
MGI:1914652Mus musculusFrom_analysisEnsEMBL-Compara
Panther
MGI:2389312Mus musculusFrom_analysisEnsEMBL-Compara
Panther
RGD:1359251Rattus norvegicusFrom_analysisEnsEMBL-Compara
Panther
RGD:1303121Rattus norvegicusFrom_analysisEnsEMBL-Compara
Panther
ParalogWBGene00007099Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015062Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021548Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021826Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021933Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in several structures, including AIZ; coelomocyte; germline precursor cell; head mesodermal cell; and sensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; proteomic; and RNA-seq studies. Is affected by twenty-five chemicals including rotenone; 4-bromodiphenyl ether; and levamisole based on RNA-seq and microarray studies. Human ortholog(s) of this gene implicated in male infertility. Human TXNDC2 enables thioredoxin-disulfide reductase (NADP) activity. Is predicted to encode a protein with the following domains: Thioredoxin-like superfamily; Thioredoxin domain; and Thioredoxin. Is an ortholog of human TXNDC2 (thioredoxin domain containing 2) and TXNDC8 (thioredoxin domain containing 8).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:12336Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:31454)
Molecular_infoCorresponding_CDSW01B11.6
Corresponding_CDS_historyW01B11.6b:wp112
Corresponding_transcriptW01B11.6.1
Corresponding_transcript_historyW01B11.6b:wp251
Associated_featureWBsf664026
WBsf219119
Experimental_infoRNAi_resultWBRNAi00093043Inferred_automaticallyRNAi_primary
WBRNAi00054501Inferred_automaticallyRNAi_primary
WBRNAi00004362Inferred_automaticallyRNAi_primary
Expr_patternExpr1018113
Expr1158048
Expr2006657
Expr2024874
Microarray_results (24)
Expression_cluster (212)
Interaction (53)
Map_infoPositivePositive_cloneW01B11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI-3.92076
ReferenceWBPaper00035663
WBPaper00064898
WBPaper00065331
MethodGene