WormBase Tree Display for Gene: WBGene00020917
expand all nodes | collapse all nodes | view schema
| WBGene00020917 | SMap | S_parent | Sequence | W01B11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | W01B11.6 | |||||||
| Molecular_name | W01B11.6 | ||||||||
| W01B11.6.1 | |||||||||
| CE26952 | |||||||||
| Other_name | CELE_W01B11.6 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | W01B11.6 | ||||||||
| DB_info | Database | AceView | gene | 1D862 | |||||
| WormQTL | gene | WBGene00020917 | |||||||
| WormFlux | gene | WBGene00020917 | |||||||
| NDB | locus_tag | CELE_W01B11.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020917|UniProtKB=O45017 | |||||||
| family | PTHR10438 | ||||||||
| NCBI | gene | 171903 | |||||||
| RefSeq | protein | NM_058738.7 | |||||||
| TrEMBL | UniProtAcc | O45017 | |||||||
| UniProt_GCRP | UniProtAcc | O45017 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01988446 | ||||||||
| WBVar00535989 | |||||||||
| WBVar00535990 | |||||||||
| WBVar02055460 | |||||||||
| WBVar01846119 | |||||||||
| WBVar00152047 | |||||||||
| WBVar00152048 | |||||||||
| WBVar01499416 | |||||||||
| WBVar01421750 | |||||||||
| WBVar01499786 | |||||||||
| WBVar01499985 | |||||||||
| WBVar01342251 | |||||||||
| WBVar00310619 | |||||||||
| WBVar00310620 | |||||||||
| WBVar00310621 | |||||||||
| WBVar01391855 | |||||||||
| WBVar01431011 | |||||||||
| WBVar01431012 | |||||||||
| WBVar00330180 | |||||||||
| WBVar00330181 | |||||||||
| WBVar00330182 | |||||||||
| WBVar00330183 | |||||||||
| WBVar00625393 | |||||||||
| WBVar00625394 | |||||||||
| WBVar00625395 | |||||||||
| WBVar00625396 | |||||||||
| WBVar00625397 | |||||||||
| WBVar00625398 | |||||||||
| WBVar00625399 | |||||||||
| WBVar00625400 | |||||||||
| WBVar00625401 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00007099 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00015062 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021548 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021826 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021933 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including AIZ; coelomocyte; germline precursor cell; head mesodermal cell; and sensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; proteomic; and RNA-seq studies. Is affected by twenty-five chemicals including rotenone; 4-bromodiphenyl ether; and levamisole based on RNA-seq and microarray studies. Human ortholog(s) of this gene implicated in male infertility. Human TXNDC2 enables thioredoxin-disulfide reductase (NADP) activity. Is predicted to encode a protein with the following domains: Thioredoxin-like superfamily; Thioredoxin domain; and Thioredoxin. Is an ortholog of human TXNDC2 (thioredoxin domain containing 2) and TXNDC8 (thioredoxin domain containing 8). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:12336 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:31454) | ||||
| Molecular_info | Corresponding_CDS | W01B11.6 | |||||||
| Corresponding_CDS_history | W01B11.6b:wp112 | ||||||||
| Corresponding_transcript | W01B11.6.1 | ||||||||
| Corresponding_transcript_history | W01B11.6b:wp251 | ||||||||
| Associated_feature | WBsf664026 | ||||||||
| WBsf219119 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00093043 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054501 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004362 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018113 | ||||||||
| Expr1158048 | |||||||||
| Expr2006657 | |||||||||
| Expr2024874 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (212) | |||||||||
| Interaction (53) | |||||||||
| Map_info | Positive | Positive_clone | W01B11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -3.92076 | |||||||
| Reference | WBPaper00035663 | ||||||||
| WBPaper00064898 | |||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
