WormBase Tree Display for Gene: WBGene00020911

WBGene00020911 SMap: S_parent: Sequence: W01A11
  Identity: Version: 2
    Name: CGC_name: cpt-6 Person_evidence: WBPerson3206
            WBPerson3205
      Sequence_name: W01A11.5
      Molecular_name: W01A11.5
        W01A11.5.1
        CE14398
      Other_name: CELE_W01A11.5 Accession_evidence: NDB BX284605
      Public_name: cpt-6
    DB_info: Database: AceView gene 5G972
        WormQTL gene WBGene00020911
        WormFlux gene WBGene00020911
        NDB locus_tag CELE_W01A11.5
        Panther gene CAEEL|WormBase=WBGene00020911|UniProtKB=Q23066
          family PTHR22589
        NCBI gene 179035
        RefSeq protein NM_072247.7
        TrEMBL UniProtAcc Q23066
        UniProt_GCRP UniProtAcc Q23066
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 18 Jul 2005 13:34:00 WBPerson2970 Name_change: CGC_name: cpt-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cpt
    Allele: WBVar01499173
      WBVar01499174
      WBVar01499740
      WBVar02023787
      WBVar01808333
      WBVar01808334
      WBVar01500129
      WBVar02068805
      WBVar00263945
      WBVar01740722
      WBVar01018686
      WBVar01018687
      WBVar01018688
      WBVar01018689
      WBVar01018690
      WBVar01018691
      WBVar01018692
      WBVar01018693
      WBVar01018694
      WBVar01018695
      WBVar01018696
      WBVar01018697
      WBVar01018698
      WBVar01018699
      WBVar01018700
      WBVar01018701
      WBVar01018702
      WBVar01018703
      WBVar01018704
      WBVar01018705
      WBVar02043458
      WBVar00460620
      WBVar00460621
      WBVar00460622
      WBVar00460623
      WBVar00460624
      WBVar00460625
      WBVar00460626
      WBVar01499677
      WBVar01499678
      WBVar01499496
      WBVar00210589
      WBVar01499316
      WBVar01500066
    RNASeq_FPKM (74)
    GO_annotation: 00077166
      00077167
      00077168
      00077169
      00077170
      00077171
      00125430
    Ortholog (34)
    Paralog: WBGene00000481 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00007175 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00008629 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00009622 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011122 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00011850 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00012907 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00019644 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00021703 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00021002 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable carnitine O-palmitoyltransferase activity. Predicted to be involved in carnitine metabolic process and fatty acid metabolic process. Predicted to be located in mitochondrion. Expressed in hypodermis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W01A11.5
    Corresponding_transcript: W01A11.5.1
    Other_sequence (20)
    Associated_feature: WBsf669042
      WBsf669043
      WBsf1000282
      WBsf1000283
      WBsf1000284
      WBsf1019811
      WBsf233809
  Experimental_info: RNAi_result (11)
    Expr_pattern: Expr8134
      Expr12150
      Expr1014578
      Expr1039111
      Expr1158034
      Expr2010519
      Expr2028759
    Drives_construct: WBCnstr00013133
      WBCnstr00020288
      WBCnstr00024791
    Construct_product: WBCnstr00024791
    Microarray_results (19)
    Expression_cluster (182)
    Interaction (5)
  Map_info: Map: V Position: -0.091125 Error: 0.002779
    Positive: Positive_clone: W01A11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026800
    WBPaper00029292
    WBPaper00031915
    WBPaper00042257
    WBPaper00049531
    WBPaper00054451
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene