WormBase Tree Display for Gene: WBGene00020895
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| WBGene00020895 | SMap | S_parent | Sequence | T28D9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | plpp-1.2 | Person_evidence | WBPerson580 | |||||
| Sequence_name | T28D9.3 | ||||||||
| Molecular_name (13) | |||||||||
| Other_name | CELE_T28D9.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | plpp-1.2 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 31 May 2017 14:23:55 | WBPerson2970 | Name_change | CGC_name | plpp-1.2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | plpp | ||||||||
| Allele (43) | |||||||||
| Strain | WBStrain00031488 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00005278 | ||||||||
| 00005279 | |||||||||
| 00055921 | |||||||||
| 00055922 | |||||||||
| 00055923 | |||||||||
| 00055924 | |||||||||
| 00055925 | |||||||||
| 00125415 | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00008749 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011524 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00018756 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable phosphatidate phosphatase activity. Predicted to be involved in phospholipid dephosphorylation; phospholipid metabolic process; and signal transduction. Predicted to be located in membrane. Is an ortholog of human PLPP3 (phospholipid phosphatase 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T28D9.3a | |||||||
| T28D9.3b | |||||||||
| T28D9.3d | |||||||||
| Corresponding_CDS_history | T28D9.3:wp127 | ||||||||
| T28D9.3c:wp247 | |||||||||
| T28D9.3e:wp247 | |||||||||
| Corresponding_transcript | T28D9.3c | ||||||||
| T28D9.3e | |||||||||
| T28D9.3a.1 | |||||||||
| T28D9.3b.1 | |||||||||
| T28D9.3b.2 | |||||||||
| T28D9.3d.1 | |||||||||
| T28D9.3d.2 | |||||||||
| Other_sequence | CRC12305_1 | ||||||||
| Tcol_isotig14688 | |||||||||
| JI167794.1 | |||||||||
| CR04593 | |||||||||
| Tcir_isotig11281 | |||||||||
| Acan_isotig07031 | |||||||||
| FK804452.1 | |||||||||
| Oden_isotig20541 | |||||||||
| Dviv_isotig23813 | |||||||||
| Name_isotig01768 | |||||||||
| Associated_feature | WBsf644291 | ||||||||
| WBsf644292 | |||||||||
| WBsf644293 | |||||||||
| WBsf221451 | |||||||||
| WBsf221452 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054418 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00070139 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019401 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027274 | ||||||||
| Expr1039103 | |||||||||
| Expr1157962 | |||||||||
| Expr2006622 | |||||||||
| Expr2024839 | |||||||||
| Drives_construct | WBCnstr00024803 | ||||||||
| Construct_product | WBCnstr00024803 | ||||||||
| Microarray_results (35) | |||||||||
| Expression_cluster (148) | |||||||||
| Interaction (19) | |||||||||
| Map_info | Map | II | Position | -0.219459 | |||||
| Positive | Positive_clone | T28D9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028527 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065998 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
