WormBase Tree Display for Gene: WBGene00020895
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WBGene00020895 | SMap | S_parent | Sequence | T28D9 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | plpp-1.2 | Person_evidence | WBPerson580 | |||
Sequence_name | T28D9.3 | ||||||
Molecular_name (13) | |||||||
Other_name | CELE_T28D9.3 | Accession_evidence | NDB | BX284602 | |||
Public_name | plpp-1.2 | ||||||
DB_info | Database (13) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | plpp | ||||||
Allele (43) | |||||||
Strain | WBStrain00031488 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00005278 | ||||||
00005279 | |||||||
00055921 | |||||||
00055922 | |||||||
00055923 | |||||||
00055924 | |||||||
00055925 | |||||||
00125415 | |||||||
Ortholog (32) | |||||||
Paralog | WBGene00008749 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00011524 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00018756 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable phosphatidate phosphatase activity. Predicted to be involved in phospholipid dephosphorylation; phospholipid metabolic process; and signal transduction. Predicted to be located in membrane. Is an ortholog of human PLPP3 (phospholipid phosphatase 3). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T28D9.3a | |||||
T28D9.3b | |||||||
T28D9.3d | |||||||
Corresponding_CDS_history | T28D9.3:wp127 | ||||||
T28D9.3c:wp247 | |||||||
T28D9.3e:wp247 | |||||||
Corresponding_transcript | T28D9.3c | ||||||
T28D9.3e | |||||||
T28D9.3a.1 | |||||||
T28D9.3b.1 | |||||||
T28D9.3b.2 | |||||||
T28D9.3d.1 | |||||||
T28D9.3d.2 | |||||||
Other_sequence | CRC12305_1 | ||||||
Tcol_isotig14688 | |||||||
JI167794.1 | |||||||
CR04593 | |||||||
Tcir_isotig11281 | |||||||
Acan_isotig07031 | |||||||
FK804452.1 | |||||||
Oden_isotig20541 | |||||||
Dviv_isotig23813 | |||||||
Name_isotig01768 | |||||||
Associated_feature | WBsf644291 | ||||||
WBsf644292 | |||||||
WBsf644293 | |||||||
WBsf221451 | |||||||
WBsf221452 | |||||||
Experimental_info | RNAi_result | WBRNAi00054418 | Inferred_automatically | RNAi_primary | |||
WBRNAi00070139 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019401 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1027274 | ||||||
Expr1039103 | |||||||
Expr1157962 | |||||||
Expr2006622 | |||||||
Expr2024839 | |||||||
Drives_construct | WBCnstr00024803 | ||||||
Construct_product | WBCnstr00024803 | ||||||
Microarray_results (35) | |||||||
Expression_cluster (148) | |||||||
Interaction (19) | |||||||
Map_info | Map | II | Position | -0.219459 | |||
Positive | Positive_clone | T28D9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00028527 | ||||||
WBPaper00038491 | |||||||
WBPaper00042257 | |||||||
WBPaper00055090 | |||||||
WBPaper00065998 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |