WormBase Tree Display for Gene: WBGene00018756
expand all nodes | collapse all nodes | view schema
| WBGene00018756 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | plpp-1.1 | Person_evidence | WBPerson580 | |||||
| Sequence_name | F53C3.13 | ||||||||
| Molecular_name (19) | |||||||||
| Other_name | CELE_F53C3.13 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | plpp-1.1 | ||||||||
| DB_info | Database | AceView | gene | 2E210 | |||||
| WormQTL | gene | WBGene00018756 | |||||||
| WormFlux | gene | WBGene00018756 | |||||||
| NDB | locus_tag | CELE_F53C3.13 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018756|UniProtKB=H2KZD1 | |||||||
| family | PTHR10165 | ||||||||
| NCBI | gene | 173734 | |||||||
| RefSeq | protein | NM_001355093.3 | |||||||
| NM_182226.5 | |||||||||
| NM_182225.6 | |||||||||
| NM_062295.6 | |||||||||
| NM_001393048.1 | |||||||||
| NM_001355092.3 | |||||||||
| TrEMBL | UniProtAcc | H2KZD2 | |||||||
| A0A238UKJ7 | |||||||||
| A0A238UKK1 | |||||||||
| H2KZD1 | |||||||||
| Q9TXU1 | |||||||||
| A0A238ULT2 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZD1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 31 May 2017 14:23:55 | WBPerson2970 | Name_change | CGC_name | plpp-1.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | plpp | ||||||||
| Allele (317) | |||||||||
| Strain | WBStrain00032244 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00002800 | ||||||||
| 00002801 | |||||||||
| 00002802 | |||||||||
| 00002803 | |||||||||
| 00002804 | |||||||||
| 00002805 | |||||||||
| 00123786 | |||||||||
| Contained_in_operon | CEOP2757 | ||||||||
| Ortholog (51) | |||||||||
| Paralog | WBGene00008749 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00011524 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020895 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable phosphatidate phosphatase activity. Predicted to be involved in phospholipid dephosphorylation; phospholipid metabolic process; and signal transduction. Predicted to be located in membrane. Is an ortholog of human PLPP1 (phospholipid phosphatase 1) and PLPP2 (phospholipid phosphatase 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F53C3.13a | |||||||
| F53C3.13b | |||||||||
| F53C3.13c | |||||||||
| F53C3.13d | |||||||||
| F53C3.13e | |||||||||
| F53C3.13f | |||||||||
| Corresponding_transcript | F53C3.13a.1 | ||||||||
| F53C3.13b.1 | |||||||||
| F53C3.13c.1 | |||||||||
| F53C3.13d.1 | |||||||||
| F53C3.13d.2 | |||||||||
| F53C3.13e.1 | |||||||||
| F53C3.13f.1 | |||||||||
| Other_sequence (53) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00076464 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032687 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007287 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048110 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015498 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110639 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014996 | ||||||||
| Expr1038080 | |||||||||
| Expr1151921 | |||||||||
| Expr2004051 | |||||||||
| Expr2022275 | |||||||||
| Microarray_results (39) | |||||||||
| Expression_cluster (127) | |||||||||
| Interaction (47) | |||||||||
| Map_info | Map | II | Position | -5.96503 | |||||
| Positive | Positive_clone | F53C3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028527 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064898 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
