WormBase Tree Display for Gene: WBGene00020757

WBGene00020757 SMap: S_parent: Sequence: T24C4
  Identity: Version: 2
    Name: CGC_name: ucr-2.3 Paper_evidence: WBPaper00027699
      Sequence_name: T24C4.1
      Molecular_name: T24C4.1
        T24C4.1.1
        CE19592
      Other_name: CELE_T24C4.1 Accession_evidence: NDB BX284603
      Public_name: ucr-2.3
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 27 Jul 2006 17:15:46 WBPerson2970 Name_change: CGC_name: ucr-2.3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ucr
    Allele (41)
    Strain: WBStrain00028976
      WBStrain00037284
    RNASeq_FPKM (74)
    GO_annotation: 00097798
      00097799
      00097800
      00105868
      00125328
    Ortholog: WBGene00057745 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00037976 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00153120 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
      WBGene00155090 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00122321 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00226241 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g4768 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g18522 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12939 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22442 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g23251 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3433 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g8913 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g22198 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g6987 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1472 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00615.g12793 Caenorhabditis angaria From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8602 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold630.g20753 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01386.g20573 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19631 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_019604 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g2509 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30333000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g6840 Caenorhabditis elegans From_analysis: WormBase-Compara
      nigoni.pc_2016.07.11_007.g26863 Caenorhabditis nigoni From_analysis: WormBase-Compara
      WBGene00241257 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00098223 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00285720 Trichuris muris From_analysis: WormBase-Compara
      WBGene00300750 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000006395 Saccharomyces cerevisiae From_analysis: Hieranoid
            OMA
            OrthoFinder
            PhylomeDB
      FB:FBgn0250814 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-030131-1269 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            PhylomeDB
      ZFIN:ZDB-GENE-040718-405 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            PhylomeDB
      HGNC:12586 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            PhylomeDB
      MGI:1914253 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            PhylomeDB
      RGD:1359150 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            PhylomeDB
    Paralog: WBGene00011679 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012158 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00015481 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00013492 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00013880 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015360 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00018426 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00018963 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00022159 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: T24C4.1 encodes an ubiquinol-cytochrome C reductase complex core protein 2 ortholog, predicted by Eisenberg and coworkers to be mitochondrial, and required for germline maintenance in mass RNAi assays. Paper_evidence: WBPaper00004424
            WBPaper00005599
            WBPaper00006395
          Curator_confirmed: WBPerson567
          Date_last_updated: 18 Jul 2005 00:00:00
      Automated_description: Predicted to enable metalloendopeptidase activity. Involved in protein folding. Predicted to be located in mitochondrial matrix. Expressed in neurons and pharyngeal gland cell. Human ortholog(s) of this gene implicated in mitochondrial complex III deficiency nuclear type 5. Is an ortholog of human UQCRC2 (ubiquinol-cytochrome c reductase core protein 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0080114 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12586)
  Molecular_info: Corresponding_CDS: T24C4.1
    Corresponding_transcript: T24C4.1.1
    Other_sequence (26)
    Associated_feature: WBsf644932
      WBsf224413
      WBsf224414
      WBsf224415
  Experimental_info: RNAi_result (14)
    Expr_pattern: Expr10186
      Expr1018565
      Expr1039037
      Expr1157577
      Expr2017740
      Expr2035879
    Drives_construct: WBCnstr00024910
    Construct_product: WBCnstr00024910
    Antibody: WBAntibody00001108
    Microarray_results (20)
    Expression_cluster (182)
    Interaction (275)
  Map_info: Map: III Position: -25.5236 Error: 0.024714
    Positive: Positive_clone: T24C4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027699
    WBPaper00030701
    WBPaper00031194
    WBPaper00038491
    WBPaper00040537
    WBPaper00041750
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene