WormBase Tree Display for Gene: WBGene00012158
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| WBGene00012158 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ucr-2.1 | Paper_evidence | WBPaper00027699 | |||||
| Sequence_name | VW06B3R.1 | ||||||||
| Molecular_name | VW06B3R.1a | ||||||||
| VW06B3R.1a.1 | |||||||||
| CE20123 | |||||||||
| VW06B3R.1b | |||||||||
| CE26825 | |||||||||
| VW06B3R.1b.1 | |||||||||
| Other_name | CELE_VW06B3R.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ucr-2.1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 27 Jul 2006 17:13:38 | WBPerson2970 | Name_change | CGC_name | ucr-2.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ucr | ||||||||
| Allele (51) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00013090 | ||||||||
| 00119337 | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00011679 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00020757 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015481 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00013492 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013880 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015360 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018426 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018963 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00022159 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable metal ion binding activity. Predicted to be located in mitochondrion. Expressed in gonad. Human ortholog(s) of this gene implicated in mitochondrial complex III deficiency nuclear type 5. Is an ortholog of human UQCRC2 (ubiquinol-cytochrome c reductase core protein 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080114 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12586) | ||||
| Molecular_info | Corresponding_CDS | VW06B3R.1a | |||||||
| VW06B3R.1b | |||||||||
| Corresponding_CDS_history | VW06B3R.1:wp42 | ||||||||
| Corresponding_transcript | VW06B3R.1a.1 | ||||||||
| VW06B3R.1b.1 | |||||||||
| Other_sequence | FK801780.1 | ||||||||
| FK806288.1 | |||||||||
| CRC01263_1 | |||||||||
| Hbac_isotig01807 | |||||||||
| FK801198.1 | |||||||||
| FF681215.1 | |||||||||
| HBC05626_1 | |||||||||
| CBC11320_1 | |||||||||
| EX914074.1 | |||||||||
| CR01924 | |||||||||
| Associated_feature | WBsf648578 | ||||||||
| WBsf1007160 | |||||||||
| WBsf1007161 | |||||||||
| WBsf1007162 | |||||||||
| WBsf1007163 | |||||||||
| WBsf1023963 | |||||||||
| WBsf1023964 | |||||||||
| WBsf236450 | |||||||||
| WBsf236451 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00112912 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00102821 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112852 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036124 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019439 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112792 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054477 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13104 | ||||||||
| Expr1015036 | |||||||||
| Expr1035379 | |||||||||
| Expr1158023 | |||||||||
| Expr2017738 | |||||||||
| Expr2035877 | |||||||||
| Drives_construct | WBCnstr00030101 | ||||||||
| Construct_product | WBCnstr00030101 | ||||||||
| Antibody | WBAntibody00001109 | ||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (192) | |||||||||
| Interaction (91) | |||||||||
| Map_info | Map | X | Position | 6.99559 | |||||
| Positive | Positive_clone | VW06B3R | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027699 | ||||||||
| WBPaper00030701 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059440 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [171016 pad] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (6.99219) | |||||||||
| [200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (6.99219) | |||||||||
| Method | Gene |
