WormBase Tree Display for Gene: WBGene00020550

WBGene00020550 SMap: S_parent: Sequence: T17H7
  Identity: Version: 4
    Name: CGC_name: idpp-1 Person_evidence: WBPerson1820
            WBPerson260
          Laboratory_evidence: OH
      Sequence_name: T17H7.1
      Molecular_name: T17H7.1
        T17H7.1.1
        CE07502
      Other_name: T17H7.1
        srlf-25 Person_evidence: WBPerson260
        CELE_T17H7.1 Accession_evidence: NDB BX284603
      Public_name: idpp-1
    DB_info: Database: AceView gene 3B359
        WormQTL gene WBGene00020550
        WormFlux gene WBGene00020550
        NDB locus_tag CELE_T17H7.1
        Panther gene CAEEL|WormBase=WBGene00020550|UniProtKB=Q22537
          family PTHR21593
        NCBI gene 175228
        RefSeq protein NM_064849.7
        TREEFAM TREEFAM_ID TF316074
        TrEMBL UniProtAcc Q22537
        UniProt_GCRP UniProtAcc Q22537
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 04 Jan 2022 10:41:14 WBPerson1983 Name_change: CGC_name: idpp-1
        3 03 Oct 2022 15:59:20 WBPerson21950 Name_change: CGC_name: idpp-1
                Other_name: T17H7.1
        4 03 Oct 2022 16:22:10 WBPerson21950 Name_change: Other_name: srlf-25
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: idpp
    Allele (76)
    RNASeq_FPKM (74)
    Ortholog (18)
    Paralog (39)
    Structured_description: Automated_description: Expressed in OLLL and OLLR. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T17H7.1
    Corresponding_transcript: T17H7.1.1
    Associated_feature: WBsf224388
      WBsf224389
      WBsf224390
  Experimental_info: RNAi_result (12)
    Expr_pattern: Chronogram504
      Expr6704
      Expr11997
      Expr1028698
      Expr1038955
      Expr1157026
      Expr2006229
      Expr2024447
    Drives_construct: WBCnstr00004034
      WBCnstr00025060
    Construct_product: WBCnstr00025060
    Microarray_results (22)
    Expression_cluster: WBPaper00036291:ung-1_regulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00040560:hpl-2_L3_upregulated
      WBPaper00041071:spe-44_downregulated
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00042561:smgl-2(RNAi)_upregulated
      WBPaper00044037:eat-2_downregulated
      WBPaper00044260:1-methylnicotinamide_upregulated
      WBPaper00044260:nicotinc-acid_upregulated
      WBPaper00044426:rotenone_24h_downregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044736:oscillating_dev_expression
      WBPaper00044857:BAR-1_downregulated
      WBPaper00045257:bar-1(ga80)_downregulated
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045774:clk-1_downregulated
      WBPaper00045934:wrn-1(gk99)_upregulated
      WBPaper00046024:sleep_downregulated_oscillating
      WBPaper00046805:csr-1(RNAi)_upregulated_Set1
      WBPaper00049377:MWCNT_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00051404:alg-2(ok304)_downregulated
      WBPaper00053020:sid-3(ok973)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053318:Aging_downregulated_mRNA_N2
      WBPaper00053318:mir-71(n4115)_downregulated_mRNA
      WBPaper00053388:dauer_regulated_Cluster5
      WBPaper00053657:N2_M.humicola-infection_24hr
      WBPaper00053814:25C_downregulated_OP50
      WBPaper00054410:set-9(rw5)_downregulated
      WBPaper00054410:set-26(tm2467)_downregulated
      WBPaper00054493:hpl-2(tm1489)_upregulated
      WBPaper00054872:egl-9(sa307)_downregulated
      WBPaper00055013:spt-16(RNAi)_downregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Rapamycin_upregulated
      WBPaper00055482:Tunicamycin_downregulated
      WBPaper00055648:nerve-ring_expressed
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00055941:nuo-6(qm200)_downregulated
      WBPaper00056167:Cry5B_downregulated
      WBPaper00056169:rrf-3(pk1426)_downregulated_L4
      WBPaper00056169:rrf-3(pk1426)_upregulated_L1
      WBPaper00056169:rrf-3(pk1426)_upregulated_L2
      WBPaper00056284:ints-11(RNAi)_downregulated
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056290:mdt-15(mg584)_upregulated
      WBPaper00056330:glycine_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056617:adr-1_upregulated_L4_transcript
      WBPaper00057041:spc-1(cas971)_upregulated
      WBPaper00057041:unc-70(cas983)_upregulated
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00057154:HeatShock_upregulated_mRNA
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058948:npr-8(ok1439)_downregulated_PA14
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059191:hsp-16.2p-LIN-29_upregulated
      WBPaper00059231:alh-6(lax105)_L4_upregulated
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00059378:lmn-1(Y59C)_downregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059754:P.aeruginosa_PA14_upregulated
      WBPaper00060084:cco-1(RNAi)_downregulated_N2
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060445:nfki-1(cer1)_downregulated_L4
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060661:hypoxia_downregulated
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00060683:hlh-11(ko1)_upregulated
      WBPaper00060703:nas-38(ok3407)_upregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060871:M.humicola-infection_24h_regulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00060909:atfs-1(et18)_downregulated
      WBPaper00061007:HB101_upregulated
      WBPaper00061007:HB115_upregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061040:FW1256_upregulated
      WBPaper00061274:hypergravity_15xg_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061527:col-128-cdh-10_9234
      WBPaper00061653:alh-4(hj221)_downregulated
      WBPaper00061753:csr-1(tor159)_upregulated_20C
      WBPaper00062056:lin-35(n745)_downregulated
      WBPaper00062056:lin-37(n758)_downregulated
      WBPaper00062156:jmjd-5(zr1234)_upregulated
      WBPaper00062293:clk-1(qm30)_downregulated
      WBPaper00062293:isp-1(qm150)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00062456:doxycycline_downregulated_CB4856_transcript
      WBPaper00062456:doxycycline_downregulated_N2_transcript
      WBPaper00062534:fat-P-80_downregulated
      WBPaper00062534:fat-P-80_downregulated_ech-6(RNAi)
      WBPaper00062554:MAGU-2_interacting
      WBPaper00062715:blmp-1(s71)_upregulated
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064130:Beta-Amyloid_24h_upregulated_mRNA
      WBPaper00064494:postdauer_upregulated_AWA
      WBPaper00064716:paraquat_downregulated
      WBPaper00064769:him-17(me24)_upregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00064952:Day1_vs_L4_downregulated_20C
      WBPaper00064952:Day1_vs_L4_downregulated_25C
      WBPaper00064952:Day5_vs_L4_downregulated_20C
      WBPaper00064952:Day5_vs_L4_downregulated_25C
      WBPaper00064952:Day10_vs_L4_downregulated_20C
      WBPaper00064952:Day10_vs_L4_downregulated_25C
      WBPaper00065315:mating_upregulated_Day2-7
      WBPaper00065373:Cisplatin_downregulated_WT
      WBPaper00065373:sek-1(km4)_downregulated_Ref
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065841:9_1
      WBPaper00065841:26_0
      WBPaper00065841:26_1
      WBPaper00065841:26_2
      WBPaper00065945:epidermis-rpoa-2(-)_downregulated_protein
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066204:CdCl2_upregulated_mRNA
      WBPaper00066232:hsf-1(RNAi)_upregulated_WT
      cgc4386_cluster_2_4
      cgc4489_group_8
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00028948:cep-1(gk138)_upregulated
      WBPaper00034739:N2lessDR1350
      WBPaper00036123:Atrazine_regulated
      WBPaper00036130:mir-243_up_regulated
      WBPaper00036286:Pattern_G
      WBPaper00037113:CPF_16C_up-regulated
      WBPaper00038172:aak-2overexpression_down_regulated
      WBPaper00038172:tax-6null_down_regulated
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00042128:gei-8(ok1671)_downregulated
      WBPaper00045865:biofilm_downregulated_B
      WBPaper00045960:L4-lethargus_downregulated
      WBPaper00046083:oga-1(ok1207)_OP50_downregulated
      WBPaper00046083:pmk-1(km25)_OP50_downregulated
      WBPaper00046548:dafachronic-acid_upregulated
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00051387:Triclosan_upregulated
      WBPaper00055899:nitroguanidine_regulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
      [cgc5976]:class_1
    Interaction (103)
  Map_info: Positive: Positive_clone: T17H7 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -26.2414
  Reference: WBPaper00038491
    WBPaper00064648
  Method: Gene