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WormBase Tree Display for Gene: WBGene00020357

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Name Class

WBGene00020357SMapS_parentSequenceCHROMOSOME_II
IdentityVersion1
NameSequence_nameT08E11.1
Molecular_nameT08E11.1
T08E11.1.1
CE30167
Other_nameCELE_T08E11.1Accession_evidenceNDBBX284602
Public_nameT08E11.1
DB_infoDatabaseAceViewgene2C119
WormQTLgeneWBGene00020357
WormFluxgeneWBGene00020357
NDBlocus_tagCELE_T08E11.1
PanthergeneCAEEL|WormBase=WBGene00020357|UniProtKB=O76644
familyPTHR23015
NCBIgene188287
RefSeqproteinNM_061689.6
TREEFAMTREEFAM_IDTF322099
TrEMBLUniProtAccO76644
UniProt_GCRPUniProtAccO76644
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar01499702
WBVar02120604
WBVar02123182
WBVar02075085
WBVar01910477
WBVar02123007
WBVar02121537
WBVar02122097
WBVar00298114
WBVar01500106
WBVar01296368
WBVar01361724
WBVar01296369
WBVar01296370
WBVar01361725
WBVar01296371
WBVar01361726
WBVar01296372
WBVar02124326
WBVar01296374
WBVar02089000
WBVar02121946
WBVar01575711
WBVar01575712
WBVar02079806
WBVar01575713
WBVar01575714
WBVar01912017
WBVar01575715
WBVar01575716
WBVar01575717
WBVar01575718
WBVar01891457
WBVar01575719
WBVar01624596
WBVar01575720
WBVar01575721
WBVar01575722
WBVar02077024
WBVar02124543
WBVar02077025
WBVar01575723
WBVar01575724
WBVar01575725
WBVar01575726
WBVar02122524
WBVar00708008
WBVar00708009
WBVar00708010
WBVar00708011
WBVar00708012
WBVar00545577
WBVar00708013
WBVar00545580
WBVar00708014
WBVar00708015
WBVar00708016
WBVar00708017
WBVar00708018
WBVar01655248
WBVar00708019
WBVar00708020
WBVar00708021
WBVar00708022
WBVar00708023
WBVar00708024
WBVar00708025
WBVar00708026
WBVar00091181
WBVar01683488
WBVar00708027
WBVar01683489
WBVar00708028
WBVar01683490
WBVar00708029
WBVar00708030
WBVar00708031
WBVar00708032
WBVar00708033
WBVar00708034
WBVar00708035
WBVar00708036
WBVar00165628
WBVar00165629
WBVar00165630
WBVar00165631
WBVar00165632
WBVar00165633
WBVar00165634
WBVar02129397
WBVar02129398
WBVar00165635
WBVar00165636
WBVar02106197
WBVar00165637
WBVar00165638
WBVar00357962
WBVar00165639
WBVar00357963
WBVar00165640
WBVar00357964
WBVar00357965
WBVar00357966
WBVar00357967
WBVar00357968
WBVar00357969
WBVar02122773
WBVar00357970
WBVar00357971
WBVar00068719
WBVar00357972
WBVar02121124
WBVar02045525
WBVar01534935
WBVar01534936
WBVar01534937
WBVar01546251
WBVar01534938
WBVar01534939
WBVar01546252
WBVar02086164
WBVar00299509
WBVar01534940
WBVar02086165
WBVar01546253
WBVar01546254
WBVar01788885
WBVar01546255
WBVar01763192
WBVar01763193
WBVar01763194
WBVar01763195
WBVar01763196
WBVar01763197
WBVar01763198
WBVar00091057
WBVar01763199
WBVar02122433
WBVar00316161
WBVar02120776
WBVar02028744
WBVar01705160
RNASeq_FPKM (74)
OrthologWBGene00150224Caenorhabditis brenneriFrom_analysisOMA
WBGene00056629Caenorhabditis remaneiFrom_analysisOMA
WBGene00066560Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WBGene00063323Caenorhabditis remaneiFrom_analysisOMA
WBGene00065169Caenorhabditis remaneiFrom_analysisOMA
WBGene00031922Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00042829Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00066552Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00066536Caenorhabditis remaneiFrom_analysisInparanoid_8
CSP26.g20757Caenorhabditis zanzibariFrom_analysisWormBase-Compara
Csp5_scaffold_01828.g23382Caenorhabditis sinicaFrom_analysisWormBase-Compara
chrII_pilon.g3491Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (221)
Structured_descriptionConcise_descriptionThis gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.Paper_evidenceWBPaper00012854
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionIs affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eighteen chemicals including methylmercury hydroxide; methylmercuric chloride; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST08E11.1
Corresponding_transcriptT08E11.1.1
Associated_featureWBsf220884
Experimental_infoRNAi_resultWBRNAi00052871Inferred_automaticallyRNAi_primary
WBRNAi00070157Inferred_automaticallyRNAi_primary
WBRNAi00095017Inferred_automaticallyRNAi_primary
WBRNAi00035354Inferred_automaticallyRNAi_primary
WBRNAi00095026Inferred_automaticallyRNAi_primary
WBRNAi00018446Inferred_automaticallyRNAi_primary
Expr_patternExpr1010361
Expr1156469
Expr2006005
Drives_constructWBCnstr00025195
Construct_productWBCnstr00025195
Microarray_results (15)
Expression_cluster (186)
InteractionWBInteraction000186682
WBInteraction000416537
WBInteraction000521190
Map_infoPositivePositive_cloneT08E11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-14.317
ReferenceWBPaper00012854
MethodGene