WormBase Tree Display for Gene: WBGene00031922

WBGene00031922 SMap: S_parent: Sequence: cb25.fpc2328
  Identity: Version: 2
    Name: Sequence_name: CBG10562
      Molecular_name: CBG10562
      Other_name: CBG_10562 Accession_evidence: NDB HE601209
      Public_name: CBG10562
    DB_info: Database: NDB locus_tag CBG_10562
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:01 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 17 Sep 2018 15:04:04 WBPerson4025 Event: Changed_class: CDS Pseudogene
    Status: Live
  Gene_info: Biotype: SO:0000336
    Allele: WBVar00115995
    RNASeq_FPKM: WBls:0000002 0.299148 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        1.00512 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        3.10818 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        8.02027 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.803928 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        0.904524 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        2.53212 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.086924 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        0.125641 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.164358 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0.083761 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0.052462 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.104924 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0.053395 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        0.056964 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.067185 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.120643 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.25561 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        2.28704 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        6.60551 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0.604429 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.953248 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        1.95359 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 0.424172 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.05497 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.441918 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.944862 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        1.01365 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        1.58539 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        1.69717 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 0.752275 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.92665 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.96545 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.00425 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.02622 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        1.42169 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.98618 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        0.995215 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.15182 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        1.81985 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0.23272 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.279023 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.290176 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0.431541 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.440679 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0.360859 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.381175 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.891934 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.440679 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.41175 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.441299 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.22702 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (13)
    Paralog: WBGene00024502 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00027420 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00036853 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00042493 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00042829 Caenorhabditis briggsae From_analysis: Inparanoid_8
    Structured_description: Automated_description: Is an ortholog of C. elegans T08E11.1; F42G2.2; and C52E2.4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: CBG10562:bp194
      CBG10562:bp267
    Corresponding_pseudogene: CBG10562
    Other_sequence: NBC02380_1
  Experimental_info: Expr_pattern: Expr1052694
    Microarray_results: GPL8303_CB6_WBGene00031922_A
      GPL14143_CBG10562_1334-1393_0.887_9_A
  Method: Gene