WormBase Tree Display for Variation: WBVar01575720
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WBVar01575720 | Name | Public_name | WBVar01575720 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00179035 | |||||||
CE30167:p.Thr625= | ||||||||
T08E11.1.1:c.1875T>G | ||||||||
HGVSg | CHROMOSOME_II:g.1840135T>G | |||||||
Sequence_details | SMap | S_parent | Sequence | C52E2 | ||||
Flanking_sequences | TAGTGTGTGGTTCTTTCCGTACGCAAGAAC | ATGGAGGATCTTCAAATTCGATATTATCGA | ||||||
Mapping_target | C52E2 | |||||||
Source_location | 225 | CHROMOSOME_II | 1840141 | 1840141 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020357 | ||||||
Transcript | T08E11.1.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | T08E11.1.1:c.1875T>G | |||||||
HGVSp | CE30167:p.Thr625= | |||||||
cDNA_position | 1883 | |||||||
CDS_position | 1875 | |||||||
Protein_position | 625 | |||||||
Exon_number | 6/7 | |||||||
Codon_change | acT/acG | |||||||
Amino_acid_change | T | |||||||
Method | WGS_Flibotte |