WormBase Tree Display for Variation: WBVar01361726
expand all nodes | collapse all nodes | view schema
WBVar01361726 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01361726 | |||||
Other_name | cewivar00179016 | ||||||
CE30167:p.Leu65= | |||||||
T08E11.1.1:c.195T>C | |||||||
HGVSg | CHROMOSOME_II:g.1836706T>C | ||||||
Sequence_details | SMap | S_parent | Sequence | T08E11 | |||
Flanking_sequences | TTCAAGGAAGAAGACACACTGGTAGAAGTGACTGAATACAATAAATTGCT | GTGAAAGAAAAACACTACATTAAAGTAGTGTGCGACGATTTGCTTTATAT | |||||
Mapping_target | T08E11 | ||||||
Type_of_mutation | Substitution | t | C | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_De_Bono | |||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539037104 | |||
Status | Live | ||||||
Affects | Gene | WBGene00020357 | |||||
Transcript | T08E11.1.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | T08E11.1.1:c.195T>C | ||||||
HGVSp | CE30167:p.Leu65= | ||||||
cDNA_position | 203 | ||||||
CDS_position | 195 | ||||||
Protein_position | 65 | ||||||
Exon_number | 2/7 | ||||||
Codon_change | ctT/ctC | ||||||
Amino_acid_change | L | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |