WormBase Tree Display for Gene: WBGene00020321
expand all nodes | collapse all nodes | view schema
| WBGene00020321 | SMap | S_parent | Sequence | T07F12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T07F12.1 | |||||||
| Molecular_name | T07F12.1 | ||||||||
| T07F12.1.1 | |||||||||
| CE35757 | |||||||||
| Other_name | CELE_T07F12.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | T07F12.1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (49) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00074900 | ||||||||
| 00074901 | |||||||||
| 00074902 | |||||||||
| 00074903 | |||||||||
| 00074904 | |||||||||
| 00074905 | |||||||||
| 00074906 | |||||||||
| Ortholog (46) | |||||||||
| Paralog | WBGene00008259 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00009962 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010082 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00017279 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | T07F12.1 encodes a member of the histidine phosphatase superfamilyorthologous to Bombyx mori ecdysteroid phosphate phosphatase (EPP),human STS1 (OMIM:609201) and human UBASH3A (OMIM:605736); in cellculture, recombinant T07F12.1 is a cytosolic enzyme with steroidphosphatase activity on ecdysone 22-phosphate (E22P), 3-epiecdysone22-phosphate, 3-epiecdysone 2-phosphate substrates, and prednisolone21-phosphate substrates, with E22P being preferred; T07F12.1 has noactivity against 3-epiecdysone 3(alpha)-phosphate or1-dehydrotestosterone sodium sulphate; unlike its Bombyx or mammalianorthologs, T07F12.1 lacks non-catalytic SH3 and UBA domains; T07F12.1 isparalogous to C. elegans C52E4.7, F09C12.8, F53B6.7, and F55A11.11. | Paper_evidence | WBPaper00029177 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 04 Apr 2007 00:00:00 | ||||||||
| Automated_description | Enables acid phosphatase activity. Located in cytosol. Is an ortholog of human UBASH3A (ubiquitin associated and SH3 domain containing A). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T07F12.1 | |||||||
| Corresponding_CDS_history | T07F12.1:wp108 | ||||||||
| Corresponding_transcript | T07F12.1.1 | ||||||||
| Other_sequence | JI170168.1 | ||||||||
| Associated_feature | WBsf648051 | ||||||||
| WBsf648052 | |||||||||
| WBsf662724 | |||||||||
| WBsf235637 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052773 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035313 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114662 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018380 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024724 | ||||||||
| Expr1038854 | |||||||||
| Expr1156381 | |||||||||
| Expr2005976 | |||||||||
| Expr2024191 | |||||||||
| Drives_construct | WBCnstr00025222 | ||||||||
| Construct_product | WBCnstr00025222 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (76) | |||||||||
| Interaction | WBInteraction000162761 | ||||||||
| WBInteraction000328785 | |||||||||
| Map_info | Positive | Positive_clone | T07F12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -6.21883 | |||||||
| Reference | WBPaper00028498 | ||||||||
| WBPaper00029177 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
