WormBase Tree Display for Gene: WBGene00017279

WBGene00017279 SMap: S_parent: Sequence: F09C12
  Identity: Version: 1
    Name: Sequence_name: F09C12.8
      Molecular_name: F09C12.8
        F09C12.8.1
        CE32360
      Other_name: CELE_F09C12.8 Accession_evidence: NDB BX284602
      Public_name: F09C12.8
    DB_info: Database: AceView gene 2F403
        WormQTL gene WBGene00017279
        WormFlux gene WBGene00017279
        NDB locus_tag CELE_F09C12.8
        Panther gene CAEEL|WormBase=WBGene00017279|UniProtKB=Q8IG34
          family PTHR16469
        NCBI gene 173881
        RefSeq protein NM_062547.5
        TREEFAM TREEFAM_ID TF313334
        TrEMBL UniProtAcc Q8IG34
        UniProt_GCRP UniProtAcc Q8IG34
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (23)
    RNASeq_FPKM (74)
    Ortholog (45)
    Paralog: WBGene00008259 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00009962 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00010082 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020321 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Concise_description: F09C12.8 encodes an ortholog, predicted to be catalytically inactive, ofBombyx mori ecdysteroid phosphate phosphatase (EPP), human STS1(OMIM:609201) and human UBASH3A (OMIM:605736); F09C12.8 is alsoparalogous to C. elegans C52E4.7, F53B6.7, F55A11.11, and T07F12.1. Paper_evidence: WBPaper00029177
          Curator_confirmed: WBPerson1843
            WBPerson567
          Date_last_updated: 04 Apr 2007 00:00:00
      Automated_description: Enriched in NSM; germ line; sensory neurons; and in male based on RNA-seq; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty chemicals including Ethanol; nicotinic acid; and methylmercuric chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Histidine phosphatase superfamily; Histidine phosphatase superfamily (branch 1); and Histidine phosphatase superfamily, clade-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F09C12.8
    Corresponding_transcript: F09C12.8.1
    Other_sequence: FD517603.1
      CSC00156_1
      CRC02489_1
      CR12700
      CJC07883_1
    Associated_feature: WBsf221232
  Experimental_info: RNAi_result: WBRNAi00012954 Inferred_automatically: RNAi_primary
      WBRNAi00044087 Inferred_automatically: RNAi_primary
      WBRNAi00076283 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023123
      Expr1148055
      Expr2002325
      Expr2020544
    Drives_construct: WBCnstr00027429
    Construct_product: WBCnstr00027429
    Microarray_results (20)
    Expression_cluster (184)
    Interaction: WBInteraction000503127
  Map_info: Positive: Positive_clone: F09C12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -2.09939
  Reference: WBPaper00028498
    WBPaper00038491
    WBPaper00055090
  Method: Gene