WormBase Tree Display for Gene: WBGene00020016
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| WBGene00020016 | SMap | S_parent | Sequence | R11G11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lipl-3 | Person_evidence | WBPerson3759 | |||||
| WBPerson7490 | |||||||||
| WBPerson545 | |||||||||
| Sequence_name | R11G11.14 | ||||||||
| Molecular_name | R11G11.14 | ||||||||
| R11G11.14.1 | |||||||||
| CE28762 | |||||||||
| Other_name | CELE_R11G11.14 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | lipl-3 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 19 Jul 2010 13:43:13 | WBPerson2970 | Name_change | CGC_name | lipl-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lipl | ||||||||
| Allele (186) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (64) | |||||||||
| Paralog | WBGene00008510 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00009773 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010062 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00013050 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019376 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022642 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021963 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable hydrolase activity, acting on ester bonds. Involved in lipid catabolic process. Located in lysosome. Human ortholog(s) of this gene implicated in Wolman disease; autosomal recessive congenital ichthyosis 8; and cholesterol ester storage disease. Is an ortholog of several human genes including LIPA (lipase A, lysosomal acid type); LIPF (lipase F, gastric type); and LIPJ (lipase family member J). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080217 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6617) | ||||
| DOID:14502 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6617) | ||||||
| DOID:14497 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6617) | ||||||
| DOID:0060717 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:23452) | ||||||
| Molecular_info | Corresponding_CDS | R11G11.14 | |||||||
| Corresponding_transcript | R11G11.14.1 | ||||||||
| Other_sequence (133) | |||||||||
| Associated_feature | WBsf233272 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00017769 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00102886 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00115885 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001388 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034869 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051811 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019660 | ||||||||
| Expr1155472 | |||||||||
| Drives_construct | WBCnstr00017678 | ||||||||
| WBCnstr00025429 | |||||||||
| Construct_product | WBCnstr00025429 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (218) | |||||||||
| Interaction (78) | |||||||||
| Map_info | Map | V | Position | -19.9825 | |||||
| Positive | Positive_clone | R11G11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00042295 | |||||||||
| WBPaper00052391 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056804 | |||||||||
| WBPaper00057084 | |||||||||
| WBPaper00058665 | |||||||||
| WBPaper00059578 | |||||||||
| WBPaper00059755 | |||||||||
| WBPaper00061998 | |||||||||
| WBPaper00064634 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
