WormBase Tree Display for Gene: WBGene00021963
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| WBGene00021963 | SMap | S_parent | Sequence | Y57E12B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | lipl-6 | Person_evidence | WBPerson3759 | |||||
| WBPerson7490 | |||||||||
| WBPerson545 | |||||||||
| Sequence_name | Y57E12B.3 | ||||||||
| Molecular_name | Y57E12B.3 | ||||||||
| Y57E12B.3.1 | |||||||||
| CE52907 | |||||||||
| Other_name | CELE_Y57E12B.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | lipl-6 | ||||||||
| DB_info | Database | AceView | gene | 5H412 | |||||
| WormQTL | gene | WBGene00021963 | |||||||
| WormFlux | gene | WBGene00021963 | |||||||
| NDB | locus_tag | CELE_Y57E12B.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021963|UniProtKB=E2S7J2 | |||||||
| family | PTHR11005 | ||||||||
| NCBI | gene | 179081 | |||||||
| RefSeq | protein | NM_072354.4 | |||||||
| TrEMBL | UniProtAcc | E2S7J2 | |||||||
| UniProt_GCRP | UniProtAcc | E2S7J2 | |||||||
| OMIM | gene | 613497 | |||||||
| 613924 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 19 Jul 2010 13:43:13 | WBPerson2970 | Name_change | CGC_name | lipl-6 | ||||
| 3 | 29 Oct 2010 09:20:42 | WBPerson1849 | Event | Split_into | WBGene00202501 | ||||
| Split_into | WBGene00202501 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lipl | ||||||||
| Allele (45) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00126151 | ||||||||
| Ortholog (57) | |||||||||
| Paralog | WBGene00008510 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00009773 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010062 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00013050 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019376 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020016 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022642 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in lipid metabolic process. Human ortholog(s) of this gene implicated in Wolman disease; autosomal recessive congenital ichthyosis 8; and cholesterol ester storage disease. Is an ortholog of several human genes including LIPA (lipase A, lysosomal acid type); LIPF (lipase F, gastric type); and LIPJ (lipase family member J). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080217 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6617) | ||||
| DOID:14502 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6617) | ||||||
| DOID:14497 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6617) | ||||||
| DOID:0060717 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:23452) | ||||||
| Molecular_info | Corresponding_CDS | Y57E12B.3 | |||||||
| Corresponding_CDS_history | Y57E12B.3:wp220 | ||||||||
| Y57E12B.3:wp268 | |||||||||
| Corresponding_transcript | Y57E12B.3.1 | ||||||||
| Other_sequence | Dviv_isotig12095 | ||||||||
| Oden_isotig24757 | |||||||||
| Dviv_isotig12096 | |||||||||
| Dviv_isotig12094 | |||||||||
| Dviv_isotig33543 | |||||||||
| Associated_feature | WBsf669095 | ||||||||
| WBsf669096 | |||||||||
| WBsf669097 | |||||||||
| WBsf669098 | |||||||||
| WBsf1000401 | |||||||||
| WBsf1000402 | |||||||||
| WBsf1019880 | |||||||||
| WBsf1019881 | |||||||||
| WBsf233878 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00021123 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057668 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057667 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025232 | ||||||||
| Expr1039662 | |||||||||
| Expr1161076 | |||||||||
| Expr2013208 | |||||||||
| Expr2031440 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (142) | |||||||||
| Interaction | WBInteraction000041955 | ||||||||
| WBInteraction000041960 | |||||||||
| WBInteraction000106169 | |||||||||
| WBInteraction000106170 | |||||||||
| WBInteraction000178033 | |||||||||
| WBInteraction000409071 | |||||||||
| WBInteraction000445333 | |||||||||
| WBInteraction000463191 | |||||||||
| WBInteraction000468142 | |||||||||
| WBInteraction000471138 | |||||||||
| Map_info | Map | V | Position | 0.479168 | Error | 0.000695 | |||
| Positive | Positive_clone | Y57E12B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059755 | |||||||||
| WBPaper00062456 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
