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WormBase Tree Display for Gene: WBGene00019970

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Name Class

WBGene00019970SMapS_parentSequenceR08F11
IdentityVersion1
NameSequence_nameR08F11.7
Molecular_nameR08F11.7
R08F11.7.1
CE12592
Other_nameCELE_R08F11.7Accession_evidenceNDBBX284605
Public_nameR08F11.7
DB_infoDatabaseAceViewgene5E267
WormQTLgeneWBGene00019970
WormFluxgeneWBGene00019970
NDBlocus_tagCELE_R08F11.7
PanthergeneCAEEL|WormBase=WBGene00019970|UniProtKB=O01892
familyPTHR11475
NCBIgene187708
RefSeqproteinNM_071647.5
TrEMBLUniProtAccO01892
UniProt_GCRPUniProtAccO01892
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00454789
WBVar00454790
WBVar00454791
WBVar00454792
WBVar00454793
WBVar00454794
WBVar01972623
WBVar00454795
WBVar00454796
WBVar00454797
WBVar00454798
WBVar00454799
WBVar01499528
WBVar01499167
WBVar01674370
WBVar01674371
WBVar01587285
WBVar01499740
WBVar02004547
WBVar02004548
WBVar01500129
WBVar01820871
WBVar01499033
WBVar00584316
WBVar00584319
WBVar01828292
WBVar01499063
WBVar00207010
WBVar00207011
WBVar00207012
WBVar00207013
WBVar00207014
WBVar00207015
WBVar01001240
WBVar01001241
WBVar01616369
WBVar01001242
WBVar01001243
WBVar01616370
WBVar01001244
WBVar01616371
WBVar01616372
WBVar01001245
WBVar01001246
WBVar01001247
WBVar01001248
WBVar01001249
WBVar01001250
WBVar01001251
WBVar01001252
WBVar01001253
WBVar01001254
WBVar01001255
WBVar01001256
WBVar01001257
WBVar01001258
WBVar01001259
WBVar01001260
WBVar01001261
WBVar01001262
WBVar01001263
WBVar01001264
WBVar01499496
WBVar01499316
WBVar01500066
RNASeq_FPKM (74)
GO_annotation00026086
00026087
00026088
00026089
00026090
00026091
00124700
00124701
00124702
OrthologWBGene00031801Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00032579Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00067602Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00148353Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00129838Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00111130Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00190590Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00104210Pristionchus pacificusFrom_analysisInparanoid_8
CBOVI.g1438Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g1440Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g12847Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g21286Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g21514Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g17127Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8809Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g13825Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g15468Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15469Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g15033Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g15962Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g9204Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g24715Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_06438.g20266Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_15815.g25179Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g17442Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g8570Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01001.g17446Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_12580Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_020692Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_50031700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g13827Caenorhabditis elegansFrom_analysisWormBase-Compara
FB:FBgn0032685Drosophila melanogasterFrom_analysisOrthoFinder
Panther
PhylomeDB
FB:FBgn0038469Drosophila melanogasterFrom_analysisOMA
OrthoFinder
Panther
FB:FBgn0038511Drosophila melanogasterFrom_analysisOMA
OrthoFinder
Panther
FB:FBgn0261987Drosophila melanogasterFrom_analysisOMA
OrthoFinder
Panther
FB:FBgn0263986Drosophila melanogasterFrom_analysisOMA
OrthoFinder
Panther
FB:FBgn0004577Drosophila melanogasterFrom_analysisOMA
OrthoFinder
Panther
ParalogWBGene00004256Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00004257Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008627Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00009897Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011530Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015841Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016700Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017968Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019613Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022743Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable peroxidase activity. Involved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR08F11.7
Corresponding_transcriptR08F11.7.1
Other_sequenceNBC00102_1
NB08310
JI247124.1
Oden_isotig27439
Associated_featureWBsf999686
WBsf1019423
WBsf231609
Experimental_infoRNAi_resultWBRNAi00017602Inferred_automaticallyRNAi_primary
WBRNAi00051562Inferred_automaticallyRNAi_primary
Expr_patternExpr1028450
Expr1155240
Expr2005501
Expr2023720
Drives_constructWBCnstr00025458
Construct_productWBCnstr00025458
Microarray_results (18)
Expression_cluster (97)
Interaction (34)
Map_infoPositivePositive_cloneR08F11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV-7.99598
ReferenceWBPaper00044963
WBPaper00064552
MethodGene