WormBase Tree Display for Gene: WBGene00019890
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| WBGene00019890 | SMap | S_parent | Sequence | R05F9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pgm-1 | Person_evidence | WBPerson555 | |||||
| Sequence_name | R05F9.6 | ||||||||
| Molecular_name | R05F9.6 | ||||||||
| R05F9.6.1 | |||||||||
| CE04809 | |||||||||
| Other_name | CELE_R05F9.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | pgm-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 13 Oct 2023 01:37:05 | WBPerson51134 | Name_change | CGC_name | pgm-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pgm | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00001259 | ||||||||
| WBStrain00001678 | |||||||||
| WBStrain00001679 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00072608 | ||||||||
| 00072609 | |||||||||
| 00072610 | |||||||||
| 00072611 | |||||||||
| 00072612 | |||||||||
| 00124651 | |||||||||
| 00124652 | |||||||||
| 00124653 | |||||||||
| 00124654 | |||||||||
| Ortholog (60) | |||||||||
| Paralog | WBGene00009006 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00012803 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013690 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable phosphoglucomutase activity. Predicted to be involved in carbohydrate metabolic process. Predicted to be located in cytosol. Expressed in head. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation It; endometrial cancer; and teratoma. Is an ortholog of human PGM1 (phosphoglucomutase 1) and PGM5 (phosphoglucomutase 5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3307 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8905) | ||||
| DOID:0080570 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8905) | ||||||
| DOID:1380 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8905) | ||||||
| Molecular_info | Corresponding_CDS | R05F9.6 | |||||||
| Corresponding_transcript | R05F9.6.1 | ||||||||
| Other_sequence (105) | |||||||||
| Associated_feature | WBsf644139 | ||||||||
| WBsf657538 | |||||||||
| WBsf987736 | |||||||||
| WBsf1012149 | |||||||||
| WBsf221193 | |||||||||
| WBsf221194 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00022412 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034621 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051317 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061512 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram2028 | ||||||||
| Expr6462 | |||||||||
| Expr6463 | |||||||||
| Expr1017790 | |||||||||
| Expr1038629 | |||||||||
| Expr1155009 | |||||||||
| Expr2005402 | |||||||||
| Expr2023623 | |||||||||
| Drives_construct | WBCnstr00002154 | ||||||||
| WBCnstr00025518 | |||||||||
| Construct_product | WBCnstr00025518 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (186) | |||||||||
| Interaction (190) | |||||||||
| Map_info | Positive | Positive_clone | R05F9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -2.94951 | |||||||
| Reference | WBPaper00029024 | ||||||||
| WBPaper00031003 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
