WormBase Tree Display for CDS: R05F9.6
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R05F9.6 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | R05F9 | ||
Structure | Source_exons | 1 | 246 | ||
300 | 580 | ||||
628 | 1513 | ||||
1565 | 1858 | ||||
DB_info | Database | KEGG | KEGG_id | 5.4.2.2 | |
TrEMBL | UniProtAcc | Q21742 | |||
UniProt | UniProtAcc | Q21742 | |||
UniProt_GCRP | UniProtAcc | Q21742 | |||
AlphaFold | entry | Q21742 | |||
NCBI_protein | GI_number | GI:351061492 | |||
TREEFAM | TREEFAM_ID | TF300350 | |||
Protein_id | CHROMOSOME_II | CCD69274 | 1 | ||
DB_remark | PGM-1 protein; contains similarity to Pfam domains PF02878 (Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I), PF02879 (Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II), PF02880 (Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III); contains similarity to Interpro domains IPR016055 (Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III), IPR005841 (Alpha-D-phosphohexomutase superfamily), IPR005845 (Alpha-D-phosphohexomutase, alpha/beta/alpha domain II), IPR036900 (Alpha-D-phosphohexomutase, C-terminal domain superfamily), IPR045244 (Phosphoglucomutase), IPR005844 (Alpha-D-phosphohexomutase, alpha/beta/alpha domain I), IPR005846 (Alpha-D-phosphohexomutase, alpha/beta/alpha domain III) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible (11) | |||||
Associated_feature | WBsf000406 | ||||
Method | curated |