WormBase Tree Display for Gene: WBGene00012803
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| WBGene00012803 | SMap | S_parent | Sequence | Y43F4B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pgm-2 | Person_evidence | WBPerson555 | |||||
| Sequence_name | Y43F4B.5 | ||||||||
| Molecular_name | Y43F4B.5a | ||||||||
| Y43F4B.5a.1 | |||||||||
| CE16630 | |||||||||
| Y43F4B.5b | |||||||||
| CE34117 | |||||||||
| Y43F4B.5b.1 | |||||||||
| Other_name | CELE_Y43F4B.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | pgm-2 | ||||||||
| DB_info | Database | AceView | gene | 3O391 | |||||
| WormQTL | gene | WBGene00012803 | |||||||
| WormFlux | gene | WBGene00012803 | |||||||
| NDB | locus_tag | CELE_Y43F4B.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012803|UniProtKB=O45934 | |||||||
| family | PTHR45745 | ||||||||
| NCBI | gene | 176749 | |||||||
| RefSeq | protein | NM_001027701.5 | |||||||
| NM_001027702.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF300692 | |||||||
| TrEMBL | UniProtAcc | Q86DA0 | |||||||
| O45934 | |||||||||
| UniProt_GCRP | UniProtAcc | O45934 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 13 Oct 2023 01:37:05 | WBPerson51134 | Name_change | CGC_name | pgm-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pgm | ||||||||
| Allele (57) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00035661 | ||||||||
| 00035662 | |||||||||
| 00035663 | |||||||||
| 00035664 | |||||||||
| 00119814 | |||||||||
| 00119815 | |||||||||
| 00119816 | |||||||||
| Contained_in_operon | CEOP3776 | ||||||||
| Ortholog (50) | |||||||||
| Paralog | WBGene00009006 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00013690 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019890 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable phosphopentomutase activity. Predicted to be involved in purine ribonucleoside salvage. Located in nucleus. Is an ortholog of human PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2 like 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y43F4B.5a | |||||||
| Y43F4B.5b | |||||||||
| Corresponding_transcript | Y43F4B.5a.1 | ||||||||
| Y43F4B.5b.1 | |||||||||
| Other_sequence (103) | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056491 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056492 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00090785 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009329 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002698 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002599 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037045 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026703 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9508 | ||||||||
| Expr1026569 | |||||||||
| Expr1035664 | |||||||||
| Expr1159960 | |||||||||
| Expr2007490 | |||||||||
| Expr2025726 | |||||||||
| Drives_construct | WBCnstr00029831 | ||||||||
| Construct_product | WBCnstr00014073 | ||||||||
| WBCnstr00029831 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (97) | |||||||||
| SAGE_tag (11) | |||||||||
| Interaction (121) | |||||||||
| Map_info | Positive | Positive_clone | Y43F4B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 21.2081 | |||||||
| Reference | WBPaper00029024 | ||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
