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WormBase Tree Display for Gene: WBGene00019883

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Name Class

WBGene00019883SMapS_parentSequenceR05D3
IdentityVersion2
NameCGC_namemet-2Person_evidenceWBPerson1730
WBPerson268
Sequence_nameR05D3.11
Molecular_nameR05D3.11
R05D3.11.1
CE47959
Other_nameCELE_R05D3.11Accession_evidenceNDBBX284603
Public_namemet-2
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
218 Jul 2005 13:34:00WBPerson2970Name_changeCGC_namemet-2
StatusLive
Gene_info (11)
Disease_infoPotential_modelDOID:12858Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10761)
DOID:10283Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10761)
DOID:1324Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10761)
DOID:1909Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10761)
DOID:12849Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10761)
DOID:3070Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10761)
DOID:5419Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10761)
Molecular_infoCorresponding_CDSR05D3.11
Corresponding_CDS_historyR05D3.11:wp186
R05D3.11:wp225
R05D3.11:wp234
Corresponding_transcriptR05D3.11.1
Other_sequence (24)
Associated_featureWBsf659282
Experimental_infoRNAi_result (41)
Expr_pattern (14)
Drives_constructWBCnstr00017003
WBCnstr00025523
WBCnstr00040148
Construct_productWBCnstr00017003
WBCnstr00025523
WBCnstr00040148
Regulate_expr_clusterWBPaper00050193:met-2(n4256)set-25(n5021)_downregulated_L1
WBPaper00050193:met-2(n4256)set-25(n5021)_upregulated_L1
WBPaper00060886:met-2(n4256)_downregulated
WBPaper00060886:met-2(n4256)_upregulated
WBPaper00060886:spr-5(by101);met-2(n4256)_downregulated
WBPaper00060886:spr-5(by101);met-2(n4256)_upregulated
WBPaper00062056:met-2(n4256)_downregulated
WBPaper00062056:met-2(n4256)_upregulated
AntibodyWBAntibody00002842
Microarray_results (21)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032031:DConiospora_upregulated_cDNA_24h
WBPaper00032425:up_in_lin-35
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044760:germline_specific
WBPaper00045486:starvation_upregulated
WBPaper00045521:Gender_Neutral
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049159:Microwave_upregulated_adult
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_downregulated_N2
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050522:mafr-1(tm6082)_downregulated
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:germline_enriched
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster1
WBPaper00054571:BPA_F3_germline_upregulated
WBPaper00055226:ADR-2_target_N2
WBPaper00055334:DLC-1_interacting
WBPaper00055648:germline_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056826:SGP_biased
WBPaper00057288:Cold_downregulated_transcript
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00060014:set-2(zr2012)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060445:ikb-1(nr2027)_upregulated_L4
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061203:spr-1(ok2144)_downregulated
WBPaper00061340:ALN
WBPaper00061340:F_U
WBPaper00061340:Parents_of_U_F_B_DVA
WBPaper00061340:Parent_of_K_Kprime
WBPaper00061340:Parent_of_tail_spike_and_hyp10
WBPaper00061341:28C_24h_downregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061527:npp-6-mtr-4_21425
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062456:doxycycline_downregulated_CB4856_protein
WBPaper00062456:doxycycline_downregulated_N2_protein
WBPaper00062498:PPM-1.D_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064716:paraquat_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065225:nhr-42(tm1375)_upregulated_S.aureus-infected
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065373:sek-1(km4)_upregulated_Ref
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_2
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031832:slr-2_regulated
WBPaper00036286:Pattern_B
WBPaper00038060:SUMO-1_upregulated
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040823:alg-1(gk214)_downregulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_old
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00048989:N2_rapamycin_downregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
[cgc6390]:Cluster_E
[cgc6390]:oogenesis-enriched
SAGE_tag (20)
Interaction (166)
Map_infoMapIIIPosition-0.275223Error0.001912
PositivePositive_cloneR05D3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (96)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene