WormBase Tree Display for Gene: WBGene00019605
expand all nodes | collapse all nodes | view schema
WBGene00019605 | SMap | S_parent | Sequence | K10B2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | ctsa-4.1 | |||||||
Sequence_name | K10B2.2 | ||||||||
Molecular_name | K10B2.2a | ||||||||
K10B2.2a.1 | |||||||||
CE02009 | |||||||||
K10B2.2b | |||||||||
CE33418 | |||||||||
K10B2.2b.1 | |||||||||
Other_name | drd-7 | Paper_evidence | WBPaper00044557 | ||||||
ctsa-1 | |||||||||
CELE_K10B2.2 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | ctsa-4.1 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 29 Apr 2015 12:07:40 | WBPerson2970 | Name_change | CGC_name | ctsa-1 | ||||
Other_name | drd-7 | ||||||||
3 | 11 Dec 2018 16:50:34 | WBPerson1983 | Name_change | CGC_name | ctsa-4.1 | ||||
Other_name | ctsa-1 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ctsa | ||||||||
Allele (19) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00055625 | ||||||||
00055626 | |||||||||
00055627 | |||||||||
00055628 | |||||||||
00055629 | |||||||||
00055630 | |||||||||
00124415 | |||||||||
00124416 | |||||||||
Contained_in_operon | CEOP2248 | ||||||||
Ortholog (38) | |||||||||
Paralog | WBGene00007462 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00008741 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00012445 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00012530 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00017969 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00018271 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00021503 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00019617 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00009058 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable serine-type carboxypeptidase activity. Predicted to be involved in proteolysis. Human ortholog(s) of this gene implicated in galactosialidosis. Is an ortholog of human CTSA (cathepsin A). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:3211 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9251) | ||||
DOID:0080540 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9251) | ||||||
Molecular_info | Corresponding_CDS | K10B2.2a | |||||||
K10B2.2b | |||||||||
Corresponding_transcript | K10B2.2a.1 | ||||||||
K10B2.2b.1 | |||||||||
Other_sequence (11) | |||||||||
Associated_feature | WBsf221428 | ||||||||
WBsf221429 | |||||||||
Experimental_info | RNAi_result | WBRNAi00001949 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00034226 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076567 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089118 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00115160 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00050472 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00016945 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1012436 | ||||||||
Expr1154182 | |||||||||
Expr2010582 | |||||||||
Expr2028822 | |||||||||
Drives_construct | WBCnstr00025735 | ||||||||
Construct_product | WBCnstr00025735 | ||||||||
Microarray_results (27) | |||||||||
Expression_cluster (238) | |||||||||
Interaction | WBInteraction000250579 | ||||||||
WBInteraction000252757 | |||||||||
WBInteraction000392796 | |||||||||
WBInteraction000431513 | |||||||||
Map_info | Positive | Positive_clone | K10B2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -0.37825 | |||||||
Reference (7) | |||||||||
Method | Gene |