WormBase Tree Display for Gene: WBGene00017969
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| WBGene00017969 | SMap | S_parent | Sequence | F32A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ctsa-3.1 | |||||||
| Sequence_name | F32A5.3 | ||||||||
| Molecular_name | F32A5.3 | ||||||||
| F32A5.3.1 | |||||||||
| CE01273 | |||||||||
| Other_name | CELE_F32A5.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | ctsa-3.1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 11 Dec 2018 16:50:34 | WBPerson1983 | Name_change | CGC_name | ctsa-3.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ctsa | ||||||||
| Allele (47) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00047863 | ||||||||
| 00047864 | |||||||||
| 00047865 | |||||||||
| 00047866 | |||||||||
| 00047867 | |||||||||
| 00047868 | |||||||||
| 00123235 | |||||||||
| 00123236 | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00007462 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00008741 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012445 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012530 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018271 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021503 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019605 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019617 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009058 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable serine-type carboxypeptidase activity. Predicted to be involved in proteolysis. Located in membrane raft. Human ortholog(s) of this gene implicated in galactosialidosis. Is an ortholog of human CTSA (cathepsin A). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3211 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9251) | ||||
| DOID:0080540 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9251) | ||||||
| Molecular_info | Corresponding_CDS | F32A5.3 | |||||||
| Corresponding_transcript | F32A5.3.1 | ||||||||
| Other_sequence (24) | |||||||||
| Associated_feature | WBsf644363 | ||||||||
| WBsf644364 | |||||||||
| WBsf717697 | |||||||||
| WBsf1012500 | |||||||||
| WBsf221576 | |||||||||
| WBsf221577 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014193 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00046075 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076366 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031643 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089063 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00115158 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025781 | ||||||||
| Expr1037730 | |||||||||
| Expr1149965 | |||||||||
| Expr2003197 | |||||||||
| Expr2021409 | |||||||||
| Drives_construct | WBCnstr00026877 | ||||||||
| Construct_product | WBCnstr00026877 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (218) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | II | Position | 0.49969 | |||||
| Positive | Positive_clone | F32A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00037777 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00043670 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059755 | |||||||||
| WBPaper00063976 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
