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WormBase Tree Display for Gene: WBGene00017969

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Name Class

WBGene00017969SMapS_parentSequenceF32A5
IdentityVersion2
NameCGC_namectsa-3.1
Sequence_nameF32A5.3
Molecular_nameF32A5.3
F32A5.3.1
CE01273
Other_nameCELE_F32A5.3Accession_evidenceNDBBX284602
Public_namectsa-3.1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
211 Dec 2018 16:50:34WBPerson1983Name_changeCGC_namectsa-3.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classctsa
Allele (47)
RNASeq_FPKM (74)
GO_annotation00047863
00047864
00047865
00047866
00047867
00047868
00123235
00123236
OrthologWBGene00033932Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00054301Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00194053Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00133852Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00110471Pristionchus pacificusFrom_analysisInparanoid_8
CBOVI.g7345Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g6941Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g12173Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g9288Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g6979Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g14315Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g22848Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25668Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8360Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00239.g7647Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-F32A5.3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold485.g1931Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00152.g5739Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_006456Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02449Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g12458Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20259810Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g4975Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00094134Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273624Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273878Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277998Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00267414Strongyloides rattiFrom_analysisWormBase-Compara
SGD:S000000343Saccharomyces cerevisiaeFrom_analysisInparanoid
OrthoInspector
SonicParanoid
SGD:S000004912Saccharomyces cerevisiaeFrom_analysisInparanoid
OrthoInspector
SonicParanoid
FB:FBgn0038738Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
OrthoInspector
ZFIN:ZDB-GENE-030131-537Danio rerioFrom_analysisOrthoFinder
Panther
PhylomeDB
ZFIN:ZDB-GENE-140106-45Danio rerioFrom_analysisOrthoFinder
Panther
PhylomeDB
HGNC:9251Homo sapiensFrom_analysisOrthoFinder
Panther
PhylomeDB
MGI:97748Mus musculusFrom_analysisOrthoFinder
Panther
PhylomeDB
ParalogWBGene00007462Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00008741Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012445Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012530Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018271Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021503Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019605Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019617Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009058Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable serine-type carboxypeptidase activity. Predicted to be involved in proteolysis. Located in membrane raft. Human ortholog(s) of this gene implicated in galactosialidosis. Is an ortholog of human CTSA (cathepsin A).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:3211Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9251)
DOID:0080540Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9251)
Molecular_infoCorresponding_CDSF32A5.3
Corresponding_transcriptF32A5.3.1
Other_sequence (24)
Associated_featureWBsf644363
WBsf644364
WBsf717697
WBsf1012500
WBsf221576
WBsf221577
Experimental_infoRNAi_resultWBRNAi00014193Inferred_automaticallyRNAi_primary
WBRNAi00046075Inferred_automaticallyRNAi_primary
WBRNAi00076366Inferred_automaticallyRNAi_primary
WBRNAi00031643Inferred_automaticallyRNAi_primary
WBRNAi00089063Inferred_automaticallyRNAi_primary
WBRNAi00115158Inferred_automaticallyRNAi_primary
Expr_patternExpr1025781
Expr1037730
Expr1149965
Expr2003197
Expr2021409
Drives_constructWBCnstr00026877
Construct_productWBCnstr00026877
Microarray_results (19)
Expression_cluster (218)
Interaction (15)
Map_infoMapIIPosition0.49969
PositivePositive_cloneF32A5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00037777
WBPaper00038491
WBPaper00043670
WBPaper00055090
WBPaper00059755
WBPaper00063976
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene