WormBase Tree Display for Gene: WBGene00019275
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| WBGene00019275 | SMap | S_parent | Sequence | H43I07 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rpac-40 | Person_evidence | WBPerson10054 | |||||
| Sequence_name | H43I07.2 | ||||||||
| Molecular_name | H43I07.2 | ||||||||
| H43I07.2.1 | |||||||||
| CE29979 | |||||||||
| Other_name | CELE_H43I07.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | rpac-40 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Sep 2012 14:29:00 | WBPerson2970 | Name_change | CGC_name | rpac-40 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rpac | ||||||||
| Allele (100) | |||||||||
| Strain | WBStrain00037571 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP5048 | ||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00007971 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00044614 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable DNA-directed 5'-3' RNA polymerase activity and protein dimerization activity. Predicted to contribute to RNA polymerase I activity and RNA polymerase III activity. Predicted to be involved in transcription by RNA polymerase I and transcription by RNA polymerase III. Predicted to be part of RNA polymerase I complex and RNA polymerase III complex. Human ortholog(s) of this gene implicated in Treacher Collins syndrome 3 and hypomyelinating leukodystrophy 11. Is an ortholog of human POLR1C (RNA polymerase I and III subunit C). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080791 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20194) | ||||
| DOID:0060792 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20194) | ||||||
| Molecular_info | Corresponding_CDS | H43I07.2 | |||||||
| Corresponding_transcript | H43I07.2.1 | ||||||||
| Other_sequence (61) | |||||||||
| Associated_feature | WBsf231653 | ||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern | Expr1014630 | ||||||||
| Expr1038328 | |||||||||
| Expr1153290 | |||||||||
| Expr2015418 | |||||||||
| Expr2033653 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (81) | |||||||||
| Interaction (309) | |||||||||
| Map_info | Map | V | Position | -6.30393 | |||||
| Positive | Positive_clone | H43I07 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
