WormBase Tree Display for Gene: WBGene00019275
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WBGene00019275 | SMap | S_parent | Sequence | H43I07 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | rpac-40 | Person_evidence | WBPerson10054 | |||
Sequence_name | H43I07.2 | ||||||
Molecular_name | H43I07.2 | ||||||
H43I07.2.1 | |||||||
CE29979 | |||||||
Other_name | CELE_H43I07.2 | Accession_evidence | NDB | BX284605 | |||
Public_name | rpac-40 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rpac | ||||||
Allele (100) | |||||||
Strain | WBStrain00037571 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (12) | |||||||
Contained_in_operon | CEOP5048 | ||||||
Ortholog (38) | |||||||
Paralog | WBGene00007971 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00044614 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to enable DNA-directed 5'-3' RNA polymerase activity and protein dimerization activity. Predicted to contribute to RNA polymerase I activity and RNA polymerase III activity. Predicted to be involved in transcription by RNA polymerase I and transcription by RNA polymerase III. Predicted to be part of RNA polymerase I complex and RNA polymerase III complex. Human ortholog(s) of this gene implicated in Treacher Collins syndrome 3 and hypomyelinating leukodystrophy 11. Is an ortholog of human POLR1C (RNA polymerase I and III subunit C). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0080791 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20194) | ||
DOID:0060792 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20194) | ||||
Molecular_info | Corresponding_CDS | H43I07.2 | |||||
Corresponding_transcript | H43I07.2.1 | ||||||
Other_sequence (61) | |||||||
Associated_feature | WBsf231653 | ||||||
Experimental_info | RNAi_result (14) | ||||||
Expr_pattern | Expr1014630 | ||||||
Expr1038328 | |||||||
Expr1153290 | |||||||
Expr2015418 | |||||||
Expr2033653 | |||||||
Microarray_results (18) | |||||||
Expression_cluster (81) | |||||||
Interaction (309) | |||||||
Map_info | Map | V | Position | -6.30393 | |||
Positive | Positive_clone | H43I07 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |