WormBase Tree Display for Gene: WBGene00019275
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WBGene00019275 | SMap | S_parent | Sequence | H43I07 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | rpac | |||||
Allele (100) | ||||||
Strain | WBStrain00037571 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation (12) | ||||||
Contained_in_operon | CEOP5048 | |||||
Ortholog (38) | ||||||
Paralog | WBGene00007971 | Caenorhabditis elegans | From_analysis | Panther | ||
WormBase-Compara | ||||||
WBGene00044614 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Predicted to enable DNA-directed 5'-3' RNA polymerase activity and protein dimerization activity. Predicted to contribute to RNA polymerase I activity and RNA polymerase III activity. Predicted to be involved in transcription by RNA polymerase I and transcription by RNA polymerase III. Predicted to be part of RNA polymerase I complex and RNA polymerase III complex. Human ortholog(s) of this gene implicated in Treacher Collins syndrome 3 and hypomyelinating leukodystrophy 11. Is an ortholog of human POLR1C (RNA polymerase I and III subunit C). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:0080791 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20194) | |
DOID:0060792 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20194) | |||
Molecular_info | Corresponding_CDS | H43I07.2 | ||||
Corresponding_transcript | H43I07.2.1 | |||||
Other_sequence (61) | ||||||
Associated_feature | WBsf231653 | |||||
Experimental_info | RNAi_result (14) | |||||
Expr_pattern | Expr1014630 | |||||
Expr1038328 | ||||||
Expr1153290 | ||||||
Expr2015418 | ||||||
Expr2033653 | ||||||
Microarray_results (18) | ||||||
Expression_cluster (81) | ||||||
Interaction (309) | ||||||
Map_info | Map | V | Position | -6.30393 | ||
Positive | Positive_clone | H43I07 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00038491 | |||||
WBPaper00055090 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |