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WormBase Tree Display for Gene: WBGene00019141

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Name Class

WBGene00019141SMapS_parentSequenceF59H6
IdentityVersion2
NameCGC_namebath-5Person_evidenceWBPerson655
Sequence_nameF59H6.11
Molecular_nameF59H6.11
F59H6.11.1
CE20917
Other_nameCELE_F59H6.11Accession_evidenceNDBBX284602
Public_namebath-5
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
222 Aug 2005 16:08:42WBPerson2970Name_changeCGC_namebath-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbath
Allele (79)
StrainWBStrain00037609
RNASeq_FPKM (74)
Contained_in_operonCEOP2060
OrthologWBGene00031696Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00031699Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00031750Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00036824Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038721Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038728Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038733Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038820Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038821Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038822Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038823Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00038824Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039292Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039296Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039426Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039431Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039767Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039775Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039776Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039846Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
WBGene00039847Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
WBGene00040234Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00040548Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00040552Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00040917Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00041960Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00042088Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00042303Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WBGene00042388Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00042557Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00042842Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00042290Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00040214Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00156131Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00038712Caenorhabditis briggsaeFrom_analysisOMA
WBGene00060784Caenorhabditis remaneiFrom_analysisOMA
WBGene00085402Caenorhabditis remaneiFrom_analysisOMA
WBGene00141180Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00057052Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00057050Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00057051Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00060627Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00068485Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00068484Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00055264Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00072245Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00064457Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00060795Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00060732Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00060791Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00066716Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00067748Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00067747Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00067745Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00085996Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00067744Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00067743Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00147604Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00027293Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00085396Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00060758Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00079289Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00060759Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00070739Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00068073Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00085416Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00054634Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00085385Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00085405Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00085381Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00068074Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00075194Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00079330Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00085379Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00070030Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00080335Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00091340Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00094146Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00112457Pristionchus pacificusFrom_analysisOMA
CSP40.g9261Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_II.g6858Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_01488.g21221Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01773.g23040Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02290.g25821Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03866.g31474Caenorhabditis sinicaFrom_analysisWormBase-Compara
chrII_pilon.g3559Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (82)
Structured_descriptionAutomated_descriptionEnriched in ABalaaaala; ABalaapaaa; germ line; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; TRAF-like; SKP1/BTB/POZ domain superfamily; and BTB/POZ domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF59H6.11
Corresponding_transcriptF59H6.11.1
Other_sequenceCR00540
CRC02056_1
CR09964
Associated_featureWBsf1011665
WBsf222734
Experimental_infoRNAi_resultWBRNAi00082625Inferred_automaticallyRNAi_primary
WBRNAi00061840Inferred_automaticallyRNAi_primary
WBRNAi00033232Inferred_automaticallyRNAi_primary
WBRNAi00049243Inferred_automaticallyRNAi_primary
WBRNAi00082528Inferred_automaticallyRNAi_primary
WBRNAi00016150Inferred_automaticallyRNAi_primary
Expr_patternExpr1025161
Expr1038264
Expr1152983
Expr2009566
Expr2027803
Drives_constructWBCnstr00026033
Construct_productWBCnstr00026033
Microarray_results (14)
Expression_cluster (110)
Interaction (78)
Map_infoMapIIPosition-13.9776Error0.002972
PositivePositive_cloneF59H6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00041771
WBPaper00060694
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene