WormBase Tree Display for Gene: WBGene00019108
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WBGene00019108 | SMap | S_parent | Sequence | F59D6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | chpf-2 | Person_evidence | WBPerson2233 | |||||
Sequence_name | F59D6.7 | ||||||||
Molecular_name | F59D6.7a | ||||||||
F59D6.7a.1 | |||||||||
CE45471 | |||||||||
F59D6.7b | |||||||||
Other_name | CELE_F59D6.7 | Accession_evidence | NDB | BX284605 | |||||
Public_name | chpf-2 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 14 Apr 2015 09:52:28 | WBPerson2970 | Name_change | CGC_name | chpf-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | chpf | ||||||||
Allele (40) | |||||||||
Strain | WBStrain00032856 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (12) | |||||||||
Ortholog (43) | |||||||||
Paralog | WBGene00003941 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00014109 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00000554 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00009260 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00020192 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Predicted to be located in plasma membrane. Expressed in ray and in male. Human ortholog(s) of this gene implicated in spastic ataxia. Is an ortholog of human CHP1 (calcineurin like EF-hand protein 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0050952 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17433) | ||||
Molecular_info | Corresponding_CDS | F59D6.7a | |||||||
Corresponding_CDS_history | F59D6.7:wp220 | ||||||||
Corresponding_transcript | F59D6.7b | ||||||||
F59D6.7a.1 | |||||||||
Other_sequence | EX547409.1 | ||||||||
PPC09890_1 | |||||||||
SC00980 | |||||||||
GR979084.1 | |||||||||
Tcir_isotig07859 | |||||||||
Acan_isotig17513 | |||||||||
Associated_feature | WBsf652522 | ||||||||
WBsf668647 | |||||||||
WBsf233455 | |||||||||
Experimental_info (7) | |||||||||
Map_info (3) | |||||||||
Reference | WBPaper00035228 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |