WormBase Tree Display for Gene: WBGene00019003
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| WBGene00019003 | SMap | S_parent | Sequence | F57B10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tmed-3 | Person_evidence | WBPerson451 | |||||
| Sequence_name | F57B10.5 | ||||||||
| Molecular_name | F57B10.5 | ||||||||
| F57B10.5.1 | |||||||||
| CE11306 | |||||||||
| Other_name | CELE_F57B10.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | tmed-3 | ||||||||
| DB_info | Database | AceView | gene | 1H139 | |||||
| WormQTL | gene | WBGene00019003 | |||||||
| WormFlux | gene | WBGene00019003 | |||||||
| NDB | locus_tag | CELE_F57B10.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019003|UniProtKB=O44738 | |||||||
| family | PTHR22811 | ||||||||
| NCBI | gene | 172372 | |||||||
| RefSeq | protein | NM_059491.5 | |||||||
| TrEMBL | UniProtAcc | O44738 | |||||||
| UniProt_GCRP | UniProtAcc | O44738 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Jan 2019 16:22:24 | WBPerson1983 | Name_change | CGC_name | tmed-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tmed | ||||||||
| Allele | WBVar00644561 | ||||||||
| WBVar00644562 | |||||||||
| WBVar00336499 | |||||||||
| WBVar00336500 | |||||||||
| WBVar00336501 | |||||||||
| WBVar00336502 | |||||||||
| WBVar01499786 | |||||||||
| WBVar01499054 | |||||||||
| WBVar01500216 | |||||||||
| WBVar01498959 | |||||||||
| Strain | WBStrain00051895 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00033245 | ||||||||
| 00033246 | |||||||||
| 00033247 | |||||||||
| 00033248 | |||||||||
| 00033249 | |||||||||
| 00033250 | |||||||||
| 00033251 | |||||||||
| 00033252 | |||||||||
| 00033253 | |||||||||
| Contained_in_operon | CEOP1336 | ||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00004766 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00007743 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00009829 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00010670 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011606 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00013360 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022255 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in Golgi organization; endoplasmic reticulum to Golgi vesicle-mediated transport; and intracellular protein transport. Predicted to be located in intracellular membrane-bounded organelle. Is an ortholog of human TMED7 (transmembrane p24 trafficking protein 7) and TMED7-TICAM2 (TMED7-TICAM2 readthrough). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F57B10.5 | |||||||
| Corresponding_transcript | F57B10.5.1 | ||||||||
| Other_sequence (80) | |||||||||
| Associated_feature | WBsf656417 | ||||||||
| WBsf217853 | |||||||||
| WBsf217854 | |||||||||
| WBsf217855 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00076497 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00116582 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003840 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048821 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016251 | ||||||||
| Expr1038204 | |||||||||
| Expr1152577 | |||||||||
| Expr2004338 | |||||||||
| Expr2022563 | |||||||||
| Drives_construct | WBCnstr00026133 | ||||||||
| Construct_product | WBCnstr00026133 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (87) | |||||||||
| Interaction (29) | |||||||||
| Map_info | Positive | Positive_clone | F57B10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 1.21315 | |||||||
| Reference | WBPaper00031384 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| WBPaper00065655 | |||||||||
| Method | Gene |
