WormBase Tree Display for Gene: WBGene00011606
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| WBGene00011606 | SMap | S_parent | Sequence | T08D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tmed-12 | Person_evidence | WBPerson451 | |||||
| Sequence_name | T08D2.1 | ||||||||
| Molecular_name | T08D2.1 | ||||||||
| T08D2.1.1 | |||||||||
| CE21168 | |||||||||
| Other_name | CELE_T08D2.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | tmed-12 | ||||||||
| DB_info | Database | AceView | gene | XA798 | |||||
| XA823 | |||||||||
| WormQTL | gene | WBGene00011606 | |||||||
| WormFlux | gene | WBGene00011606 | |||||||
| NDB | locus_tag | CELE_T08D2.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011606|UniProtKB=A4F319 | |||||||
| family | PTHR22811 | ||||||||
| NCBI | gene | 188279 | |||||||
| RefSeq | protein | NM_075653.1 | |||||||
| TREEFAM | TREEFAM_ID | TF314123 | |||||||
| TrEMBL | UniProtAcc | A4F319 | |||||||
| UniProt_GCRP | UniProtAcc | A4F319 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Jan 2019 16:22:24 | WBPerson1983 | Name_change | CGC_name | tmed-12 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tmed | ||||||||
| Allele (12) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004438 | ||||||||
| 00004439 | |||||||||
| 00004440 | |||||||||
| 00004441 | |||||||||
| 00004442 | |||||||||
| 00004443 | |||||||||
| 00004444 | |||||||||
| 00004445 | |||||||||
| 00004446 | |||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00004766 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00007743 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00009829 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00010670 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019003 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00013360 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022255 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in Golgi organization; endoplasmic reticulum to Golgi vesicle-mediated transport; and intracellular protein transport. Predicted to be located in intracellular membrane-bounded organelle. Is an ortholog of human TMED4 (transmembrane p24 trafficking protein 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T08D2.1 | |||||||
| Corresponding_transcript | T08D2.1.1 | ||||||||
| Other_sequence | AS14020 | ||||||||
| HC07497 | |||||||||
| ACC15550_1 | |||||||||
| PT03471 | |||||||||
| EX543869.1 | |||||||||
| PTC02769_1 | |||||||||
| EX535089.1 | |||||||||
| XI04991 | |||||||||
| HG10165 | |||||||||
| XIC05662_1 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018439 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00026239 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027465 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035350 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00090918 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052860 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013215 | ||||||||
| Expr1156462 | |||||||||
| Expr2006000 | |||||||||
| Expr2024216 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (53) | |||||||||
| Interaction (39) | |||||||||
| Map_info | Positive | Positive_clone | T08D2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -20.7055 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
