WormBase Tree Display for Gene: WBGene00019003
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WBGene00019003 | SMap | S_parent | Sequence | F57B10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | tmed-3 | Person_evidence | WBPerson451 | |||||
Sequence_name | F57B10.5 | ||||||||
Molecular_name | F57B10.5 | ||||||||
F57B10.5.1 | |||||||||
CE11306 | |||||||||
Other_name | CELE_F57B10.5 | Accession_evidence | NDB | BX284601 | |||||
Public_name | tmed-3 | ||||||||
DB_info | Database | AceView | gene | 1H139 | |||||
WormQTL | gene | WBGene00019003 | |||||||
WormFlux | gene | WBGene00019003 | |||||||
NDB | locus_tag | CELE_F57B10.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00019003|UniProtKB=O44738 | |||||||
family | PTHR22811 | ||||||||
NCBI | gene | 172372 | |||||||
RefSeq | protein | NM_059491.5 | |||||||
TrEMBL | UniProtAcc | O44738 | |||||||
UniProt_GCRP | UniProtAcc | O44738 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 09 Jan 2019 16:22:24 | WBPerson1983 | Name_change | CGC_name | tmed-3 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tmed | ||||||||
Allele (10) | |||||||||
Strain | WBStrain00051895 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00033245 | ||||||||
00033246 | |||||||||
00033247 | |||||||||
00033248 | |||||||||
00033249 | |||||||||
00033250 | |||||||||
00033251 | |||||||||
00033252 | |||||||||
00033253 | |||||||||
Contained_in_operon | CEOP1336 | ||||||||
Ortholog (37) | |||||||||
Paralog | WBGene00004766 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00007743 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00009829 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00010670 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00011606 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00013360 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00022255 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to be involved in Golgi organization; endoplasmic reticulum to Golgi vesicle-mediated transport; and intracellular protein transport. Predicted to be located in intracellular membrane-bounded organelle. Is an ortholog of human TMED7 (transmembrane p24 trafficking protein 7) and TMED7-TICAM2 (TMED7-TICAM2 readthrough). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F57B10.5 | |||||||
Corresponding_transcript | F57B10.5.1 | ||||||||
Other_sequence (80) | |||||||||
Associated_feature | WBsf656417 | ||||||||
WBsf217853 | |||||||||
WBsf217854 | |||||||||
WBsf217855 | |||||||||
Experimental_info | RNAi_result | WBRNAi00076497 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00116582 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00003840 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048821 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1016251 | ||||||||
Expr1038204 | |||||||||
Expr1152577 | |||||||||
Expr2004338 | |||||||||
Expr2022563 | |||||||||
Drives_construct | WBCnstr00026133 | ||||||||
Construct_product | WBCnstr00026133 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (87) | |||||||||
Interaction (29) | |||||||||
Map_info | Positive | Positive_clone | F57B10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | 1.21315 | |||||||
Reference | WBPaper00031384 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00064339 | |||||||||
WBPaper00065655 | |||||||||
Method | Gene |